RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA488043", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA488043 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27139175 27139175 PRJNA488043_P_NODE_3762_length_733_cov_2.715909_g599_i1 PRJNA488043 3762 733 2.715909 19.90761297 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 59.7 1.25e-6   NR RAL57559.1 1912928 g599 i1 35.6 0.425648021828104 104 64 42.2 2 14 322 107 208 RAL57559.1 hypothetical protein BLD25_02805 [Candidatus Gracilibacteria bacterium GN02-872] diamond 312 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872
32762951 32762951 PRJNA488043_P_NODE_13920_length_245_cov_1.305556_g11678_i0 PRJNA488043 13920 245 1.305556 3.1986122 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 80.1 8e-17   NR MBP9779161.1 2044595 g11678 i0 50.6 2.90204081632653 79 34 96.7 1 9 245 10 83 MBP9779161.1 single-stranded DNA-binding protein [Candidatus Altimarinota bacterium] diamond 711 80.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;