contig_metadata
3 rows where bioproject = "PRJNA485080", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27044706 | 27044706 | PRJNA485080_P_NODE_14482_length_297_cov_0.933036_g14388_i0 | PRJNA485080 | 14482 | 297 | 0.933036 | 2.77111692 | Brugia malayi | 6279 | Nematoda | Nematoda | 110 | 1.87e-28 | NR | CDQ07418.1 | 6279 | g14388 | i0 | 68.1 | 2.72727272727273 | 69 | 22 | 69.7 | 0 | 295 | 89 | 70 | 138 | CDQ07418.1 Bm11692, partial [Brugia malayi] | diamond | 810 | 110 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Brugia | Brugia malayi | |
| 27708552 | 27708552 | PRJNA485080_P_NODE_23004_length_251_cov_0.865169_g22910_i0 | PRJNA485080 | 23004 | 251 | 0.865169 | 2.17157419 | Aphelenchoides avenae | 70226 | Nematoda | Nematoda | 43.9 | 0.0164 | NR | KAH7728860.1 | 70226 | g22910 | i0 | 33.3 | 0.752988047808765 | 63 | 41 | 75.3 | 1 | 63 | 251 | 81 | 142 | KAH7728860.1 Protein E01G6.1 [Aphelenchoides avenae] | diamond | 189 | 43.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Aphelenchoides | Aphelenchoides avenae | |
| 30408649 | 30408649 | PRJNA485080_P_NODE_7793_length_363_cov_2.337931_g7699_i0 | PRJNA485080 | 7793 | 363 | 2.337931 | 8.48668953 | Rhabditida | 6236 | Nematoda | Nematoda | 157 | 1.95e-43 | NR | KAF8367523.1 | 54126 | g7699 | i0 | 92.5 | 14.7272727272727 | 120 | 9 | 99.2 | 0 | 361 | 2 | 268 | 387 | KAF8367523.1 lin-53, partial [Pristionchus pacificus] | diamond | 5346 | 157 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pacificus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;