RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA485080", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA485080 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22125715 22125715 PRJNA485080_P_NODE_3618_length_491_cov_0.968900_g3524_i0 PRJNA485080 3618 491 0.9689 4.757299 Rhizopus microsporus 58291 Fungi Fungi 169 4.56e-37   NTclustered gi|1331194283|ref|XM_023605248.1| 1340429 g3524 i0 74.76 23.0020366598778 416 86 83 17 82 488 498 93 Rhizopus microsporus ATCC 52813 40S ribosomal protein-like protein S18 (RHIMIDRAFT_111343), mRNA blastn 11294 169 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
27676802 27676802 PRJNA485080_P_NODE_11064_length_325_cov_1.222222_g10970_i0 PRJNA485080 11064 325 1.222222 3.9722215 Funneliformis caledonium 1117310 Fungi Fungi 64.3 1.99e-9   NR CAG8722833.1 1117310 g10970 i0 39.6 0.84 91 48 79.4 2 266 9 130 218 CAG8722833.1 6218_t:CDS:2 [Funneliformis caledonium] diamond 273 64.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis caledonium
31118690 31118690 PRJNA485080_P_NODE_27935_length_248_cov_0.880000_g27841_i0 PRJNA485080 27935 248 0.88 2.1824 Absidia glauca 4829 Fungi Fungi 42.7 0.0387   NR SAM07952.1 4829 g27841 i0 40 0.725806451612903 60 36 72.6 0 243 64 48 107 SAM07952.1 hypothetical protein [Absidia glauca] diamond 180 42.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;