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contig_metadata

15 rows where bioproject = "PRJNA485080" and tax_clade = "Discoba"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 15 ✖

bioproject 1

  • PRJNA485080 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
449206 449206 PRJNA485080_P_NODE_28621_length_248_cov_0.880000_g28527_i0 PRJNA485080 28621 248 0.88 2.1824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 435 1.91e-117   NTclustered gi|256665305|gb|AC237576.1| 5762 g28527 i0 98.77 20.8427419354839 244 3 98 0 1 244 2329 2086 Naegleria gruberi clone JGIBCCN-9M20, complete sequence blastn 5169 435 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3000119 3000119 PRJNA485080_P_NODE_41143_length_242_cov_0.911243_g41049_i0 PRJNA485080 41143 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 436 5.1499999999999985e-118   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g41049 i0 99.174 98.7809917355372 242 2 100 0 1 242 283 42 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 23905 436 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9376809 9376809 PRJNA485080_P_NODE_17008_length_279_cov_1.495146_g16914_i0 PRJNA485080 17008 279 1.495146 4.17145734 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 516 7.58e-142   NTclustered gi|399764158|gb|JQ271669.1| 1217110 g16914 i0 100 39.2007168458781 279 0 100 0 1 279 1132 854 Allovahlkampfia sp. PKD 2011a strain PS1073J 18S ribosomal RNA gene, partial sequence blastn 10937 516 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
10652930 10652930 PRJNA485080_P_NODE_34049_length_245_cov_0.895349_g33955_i0 PRJNA485080 34049 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 364 2.5e-96   NTclustered gi|291000016|ref|XM_002682530.1| 5762 g33955 i0 93.469 1 245 16 100 0 1 245 264 20 Naegleria gruberi cathepsin C (NAEGRDRAFT_37577), mRNA blastn 245 364 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10653008 10653008 PRJNA485080_P_NODE_38789_length_243_cov_0.905882_g38695_i0 PRJNA485080 38789 243 0.905882 2.20129326 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 279 9.23e-71   NTclustered gi|290990461|ref|XM_002677809.1| 5762 g38695 i0 88.136 0.97119341563786 236 26 97 2 9 243 325 91 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_66780), partial mRNA blastn 236 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15751950 15751950 PRJNA485080_P_NODE_36413_length_244_cov_0.900585_g36319_i0 PRJNA485080 36413 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 385 1.91e-102   NTclustered gi|290998620|ref|XM_002681833.1| 5762 g36319 i0 95.082 3.95081967213115 244 12 100 0 1 244 2008 2251 Naegleria gruberi transcriptional repressor TUP1 (NAEGRDRAFT_78346), mRNA blastn 964 385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17026430 17026430 PRJNA485080_P_NODE_27654_length_248_cov_1.691429_g27560_i0 PRJNA485080 27654 248 1.691429 4.19474392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 359 1.18e-94   NTclustered gi|290992483|ref|XM_002678818.1| 5762 g27560 i0 92.742 1 248 18 100 0 1 248 334 87 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_32649), partial mRNA blastn 248 359 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18948902 18948902 PRJNA485080_P_NODE_3775_length_482_cov_1.503667_g3681_i0 PRJNA485080 3775 482 1.503667 7.24767494 Naegleria 5761 Heterolobosea other_Eukaryota 213 2.04e-50   NTclustered gi|2031946985|emb|OD958550.1| 5763 g3681 i0 82.171 26.0145228215768 258 36 54 5 1 258 3013 3260 Naegleria fowleri Karachi_NF001 strain blastn 12539 213 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20223745 20223745 PRJNA485080_P_NODE_19596_length_262_cov_1.629630_g19502_i0 PRJNA485080 19596 262 1.62963 4.2696306 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 484 1.99e-132   NTclustered gi|89148135|gb|DQ388520.1| 373144 g19502 i0 100 89.7404580152672 262 0 100 0 1 262 2088 1827 Heterolobosea sp. OSA 16S small subunit ribosomal RNA gene, partial sequence blastn 23512 484 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. OSA
23401597 23401597 PRJNA485080_P_NODE_38319_length_243_cov_0.905882_g38225_i0 PRJNA485080 38319 243 0.905882 2.20129326 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 200 7.39e-47   NTclustered gi|290987290|ref|XM_002676310.1| 5762 g38225 i0 84.878 0.843621399176955 205 23 83 6 8 208 1059 859 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_58240), mRNA blastn 205 200 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24675022 24675022 PRJNA485080_P_NODE_15680_length_288_cov_1.139535_g15586_i0 PRJNA485080 15680 288 1.139535 3.2818608 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 460 3.74e-125   NTclustered gi|290997252|ref|XM_002681150.1| 5762 g15586 i0 95.789 22.5659722222222 285 12 99 0 4 288 629 345 Naegleria gruberi HSP70 family protein (NAEGRDRAFT_82977), mRNA blastn 6499 460 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27897424 27897424 PRJNA485080_P_NODE_36765_length_244_cov_0.900585_g36671_i0 PRJNA485080 36765 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 108 1.43e-25   NR XP_002676895.1 5762 g36671 i0 72 1.00819672131148 82 20 99.6 2 243 1 377 456 XP_002676895.1 uncharacterized protein NAEGRDRAFT_49200 [Naegleria gruberi] diamond 246 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30266162 30266162 PRJNA485080_P_NODE_15792_length_287_cov_1.439252_g15698_i0 PRJNA485080 15792 287 1.439252 4.13065324 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 94.7 6.38e-23   NR XP_002677819.1 5762 g15698 i0 56.1 1.02439024390244 98 31 95.1 4 5 277 9 101 XP_002677819.1 uncharacterized protein NAEGRDRAFT_67079 [Naegleria gruberi] diamond 294 94.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30424274 30424274 PRJNA485080_P_NODE_18093_length_272_cov_1.547739_g17999_i0 PRJNA485080 18093 272 1.547739 4.20985008 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 141 7.95e-39   NR XP_002675987.1 5762 g17999 i0 73.3 0.992647058823529 90 23 99.3 1 3 272 50 138 XP_002675987.1 uncharacterized protein NAEGRDRAFT_68955 [Naegleria gruberi] diamond 270 141 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30613309 30613309 PRJNA485080_P_NODE_41073_length_242_cov_0.911243_g40979_i0 PRJNA485080 41073 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 91.3 3.05e-19   NR XP_002671249.1 5762 g40979 i0 66.7 1.00413223140496 81 25 99.2 2 242 3 166 245 XP_002671249.1 uncharacterized protein NAEGRDRAFT_59502 [Naegleria gruberi] diamond 243 91.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;