RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA484127", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA484127 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27756024 27756024 PRJNA484127_P_NODE_31984_length_250_cov_0.881356_g31835_i0 PRJNA484127 31984 250 0.881356 2.20339 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 105 1.29e-26   NR KAA6388004.1 222440 g31835 i0 55.6 2.916 81 36 97.2 0 248 6 87 167 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 729 105 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28718555 28718555 PRJNA484127_P_NODE_25267_length_269_cov_2.091837_g25118_i0 PRJNA484127 25267 269 2.091837 5.62704153 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 51.6 1.7e-5   NR KAK2956265.1 2049346 g25118 i0 66.7 0.401486988847584 36 12 40.1 0 268 161 130 165 KAK2956265.1 putative 60S ribosomal protein L18-3 [Blattamonas nauphoetae] diamond 108 51.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
28781428 28781428 PRJNA484127_P_NODE_35067_length_246_cov_1.410405_g34918_i0 PRJNA484127 35067 246 1.410405 3.4695963 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 52.8 1.13e-5   NR KAJ4463103.1 342808 g34918 i0 45.8 2.96341463414634 59 28 72 1 178 2 182 236 KAJ4463103.1 putative Hydroxylamine reductase [Paratrimastix pyriformis] diamond 729 52.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31024200 31024200 PRJNA484127_P_NODE_14475_length_332_cov_2.123552_g14326_i0 PRJNA484127 14475 332 2.123552 7.05019264 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 87.8 1.72e-17   NR KAJ4461259.1 342808 g14326 i0 42.4 1.8433734939759 99 56 88.6 1 310 17 1106 1204 KAJ4461259.1 putative MFS-type transporter [Paratrimastix pyriformis] diamond 612 87.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;