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contig_metadata

31 rows where bioproject = "PRJNA482207" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 31 ✖

bioproject 1

  • PRJNA482207 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
448028 448028 PRJNA482207_P_NODE_2261_length_611_cov_1.864312_g2161_i0 PRJNA482207 2261 611 1.864312 11.39094632 Polymycovirus colletotrichi 3431808 Viruses Viruses 1129 0   NTclustered gi|2500668202|ref|NC_078029.1| 2029458 g2161 i0 100 2.72667757774141 611 0 100 0 1 611 45 655 Colletotrichum camelliae filamentous virus 1 segment RNA 2, complete sequence blastn 1666 1129 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
2998624 2998624 PRJNA482207_P_NODE_16643_length_271_cov_1.166667_g16533_i0 PRJNA482207 16643 271 1.166667 3.16166757 Polymycovirus colletotrichi 3431808 Viruses Viruses 484 2.07e-132   NTclustered gi|2500668202|ref|NC_078029.1| 2029458 g16533 i0 98.893 1 271 3 100 0 1 271 1714 1984 Colletotrichum camelliae filamentous virus 1 segment RNA 2, complete sequence blastn 271 484 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
2998629 2998629 PRJNA482207_P_NODE_1683_length_699_cov_3.247604_g1594_i0 PRJNA482207 1683 699 3.247604 22.70075196 Polymycovirus colletotrichi 3431808 Viruses Viruses 1286 0   NTclustered gi|2500668191|ref|NC_078024.1| 2029458 g1594 i0 99.857 1.19599427753934 699 1 100 0 1 699 717 19 Colletotrichum camelliae filamentous virus 1 segment RNA 5, complete sequence blastn 836 1286 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
6825409 6825409 PRJNA482207_P_NODE_13366_length_297_cov_1.343750_g13256_i0 PRJNA482207 13366 297 1.34375 3.9909375 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 438 1.8099999999999998e-118   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g13256 i0 93.266 1 297 20 100 0 1 297 4073 3777 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 297 438 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8100947 8100947 PRJNA482207_P_NODE_14887_length_284_cov_1.791469_g14777_i0 PRJNA482207 14887 284 1.791469 5.08777196 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 475 1.3099999999999999e-129   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g14777 i0 96.831 1 284 9 100 0 1 284 5540 5823 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 284 475 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8100984 8100984 PRJNA482207_P_NODE_1727_length_690_cov_1.659643_g1635_i0 PRJNA482207 1727 690 1.659643 11.4515367 RD114 retrovirus 11834 Viruses Viruses 1264 0   NTclustered gi|306482054|dbj|AB559882.1| 11834 g1635 i0 99.71 47.2521739130435 690 2 100 0 1 690 7555 8244 RD114 retrovirus proviral DNA, complete genome, strain: CRT1 blastn 32604 1264 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus RD114 retrovirus
8101294 8101294 PRJNA482207_P_NODE_847_length_957_cov_7.555430_g778_i0 PRJNA482207 847 957 7.55543 72.3054651 Polymycovirus colletotrichi 3431808 Viruses Viruses 1751 0   NTclustered gi|2500668194|ref|NC_078025.1| 2029458 g778 i0 99.79 1.99477533960293 954 2 99 0 4 957 969 16 Colletotrichum camelliae filamentous virus 1 segment RNA 8, complete sequence blastn 1909 1751 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
8101295 8101295 PRJNA482207_P_NODE_87_length_2707_cov_3.667426_g77_i0 PRJNA482207 87 2707 3.667426 99.27722182 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2481 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g77 i0 91.807 0.872922053934245 1782 140 87 6 1 1779 7107 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 2363 2481 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
11926815 11926815 PRJNA482207_P_NODE_3430_length_508_cov_1.632184_g3320_i0 PRJNA482207 3430 508 1.632184 8.29149472 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 440 9.079999999999996e-119   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3320 i0 95 0.718503937007874 280 14 72 0 223 502 5194 4915 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 365 440 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
13201576 13201576 PRJNA482207_P_NODE_2031_length_644_cov_1.252189_g1933_i0 PRJNA482207 2031 644 1.252189 8.06409716 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1061 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1933 i0 96.273 1 644 24 100 0 1 644 7019 6376 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 644 1061 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
14476489 14476489 PRJNA482207_P_NODE_19092_length_251_cov_3.016854_g18982_i0 PRJNA482207 19092 251 3.016854 7.57230354 Polymycovirus colletotrichi 3431808 Viruses Viruses 464 2.47e-126   NTclustered gi|2500668191|ref|NC_078024.1| 2029458 g18982 i0 100 1 251 0 100 0 1 251 994 744 Colletotrichum camelliae filamentous virus 1 segment RNA 5, complete sequence blastn 251 464 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
14476619 14476619 PRJNA482207_P_NODE_25972_length_245_cov_0.895349_g25862_i0 PRJNA482207 25972 245 0.895349 2.19360505 Rheavirus sinusmexicani 3047716 Viruses Viruses 233 7.36e-57   NTclustered gi|310830989|ref|NC_014637.1| 693272 g25862 i0 84.211 2.73877551020408 247 31 99 8 3 245 518291 518049 Cafeteria roenbergensis virus BV-PW1, complete genome blastn 671 233 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Rheavirus Rheavirus sinusmexicani
17025074 17025074 PRJNA482207_P_NODE_10514_length_324_cov_1.227092_g10404_i0 PRJNA482207 10514 324 1.227092 3.97577808 Polymycovirus colletotrichi 3431808 Viruses Viruses 599 8.67e-167   NTclustered gi|2500668206|ref|NC_078031.1| 2029458 g10404 i0 100 1 324 0 100 0 1 324 550 227 Colletotrichum camelliae filamentous virus 1 segment RNA 3, complete sequence blastn 324 599 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
17025082 17025082 PRJNA482207_P_NODE_10854_length_320_cov_2.157895_g10744_i0 PRJNA482207 10854 320 2.157895 6.905264 Polymycovirus colletotrichi 3431808 Viruses Viruses 592 1.4299999999999996e-164   NTclustered gi|2500668206|ref|NC_078031.1| 2029458 g10744 i0 100 1 320 0 100 0 1 320 1533 1852 Colletotrichum camelliae filamentous virus 1 segment RNA 3, complete sequence blastn 320 592 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
17025434 17025434 PRJNA482207_P_NODE_494_length_1215_cov_4.555166_g450_i0 PRJNA482207 494 1215 4.555166 55.3452669 Polymycovirus colletotrichi 3431808 Viruses Viruses 2244 0   NTclustered gi|2500668196|ref|NC_078026.1| 2029458 g450 i0 100 1.8 1215 0 100 0 1 1215 30 1244 Colletotrichum camelliae filamentous virus 1 segment RNA 4, complete sequence blastn 2187 2244 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
18299493 18299493 PRJNA482207_P_NODE_18115_length_259_cov_2.516129_g18005_i0 PRJNA482207 18115 259 2.516129 6.51677411 Polymycovirus colletotrichi 3431808 Viruses Viruses 473 4.25e-129   NTclustered gi|2500668206|ref|NC_078031.1| 2029458 g18005 i0 99.614 1 259 1 100 0 1 259 942 684 Colletotrichum camelliae filamentous virus 1 segment RNA 3, complete sequence blastn 259 473 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
19573677 19573677 PRJNA482207_P_NODE_16496_length_272_cov_1.402010_g16386_i0 PRJNA482207 16496 272 1.40201 3.8134672 Zebrafish influenza-like virus RQ12 Viruses Viruses 401 2.1499999999999993e-107   NTclustered gi|1912436624|gb|MT926384.1| RQ12 g16386 i0 93.358 0.996323529411765 271 18 99 0 1 271 565 835 Siamese algae-eater influenza-like virus strain SAEILV/fish-T1K hemagglutinin (HA) gene, complete cds blastn 271 401 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
22124484 22124484 PRJNA482207_P_NODE_23458_length_247_cov_1.701149_g23348_i0 PRJNA482207 23458 247 1.701149 4.20183803 Polymycovirus colletotrichi 3431808 Viruses Viruses 435 1.9e-117   NTclustered gi|2500668200|ref|NC_078028.1| 2029458 g23348 i0 98.381 1 247 4 100 0 1 247 855 1101 Colletotrichum camelliae filamentous virus 1 segment RNA 1, complete sequence blastn 247 435 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
23400283 23400283 PRJNA482207_P_NODE_24179_length_247_cov_0.885057_g24069_i0 PRJNA482207 24179 247 0.885057 2.18609079 Dalbergia cochinchinensis dicistro-like virus 1 2872414 Viruses Viruses 398 2.4899999999999996e-106   NTclustered gi|2261582439|tpg|BK059251.1| 2872414 g24069 i0 95.918 0.991902834008097 245 10 99 0 1 245 1100 1344 TPA_asm: Dalbergia cochinchinensis dicistro-like virus 1 isolate Dc1 non-structural polyprotein gene, complete cds; and structural polyprotein gene, partial cds blastn 245 398 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dalbergia cochinchinensis dicistro-like virus 1
24674259 24674259 PRJNA482207_P_NODE_30920_length_211_cov_4.079710_g30810_i0 PRJNA482207 30920 211 4.07971 8.6081881 Polymycovirus colletotrichi 3431808 Viruses Viruses 390 3.459999999999999e-104   NTclustered gi|2500668204|ref|NC_078030.1| 2029458 g30810 i0 100 2.02843601895735 211 0 100 0 1 211 958 748 Colletotrichum camelliae filamentous virus 1 segment RNA 7, complete sequence blastn 428 390 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
24674309 24674309 PRJNA482207_P_NODE_820_length_968_cov_2.405587_g752_i0 PRJNA482207 820 968 2.405587 23.28608216 Polymycovirus colletotrichi 3431808 Viruses Viruses 1772 0   NTclustered gi|2500668198|ref|NC_078027.1| 2029458 g752 i0 99.69 2.00619834710744 969 2 100 1 1 968 52 1020 Colletotrichum camelliae filamentous virus 1 segment RNA 6, complete sequence blastn 1942 1772 1 Viruses           Polymycoviridae Polymycovirus Polymycovirus colletotrichi
27107688 27107688 PRJNA482207_P_NODE_22382_length_248_cov_1.760000_g22272_i0 PRJNA482207 22382 248 1.76 4.3648 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 60.8 1.69e-8   NR AVM87439.1 3063761 g22272 i0 55.1 0.592741935483871 49 22 59.3 0 147 1 928 976 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 147 60.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
28118431 28118431 PRJNA482207_P_NODE_25865_length_245_cov_0.895349_g25755_i0 PRJNA482207 25865 245 0.895349 2.19360505 Lindangsbacken virus 2651947 Viruses Viruses 46.2 0.00231   NR QGA70947.1 2651947 g25755 i0 41.1 1.99591836734694 56 32 67.3 1 45 209 311 366 QGA70947.1 RNA-dependent RNA polymerase [Lindangsbacken virus] diamond 489 46.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Lindangsbacken virus
28150282 28150282 PRJNA482207_P_NODE_19145_length_251_cov_1.443820_g19035_i0 PRJNA482207 19145 251 1.44382 3.6239882 Escherichia phage D2 2915331 Viruses Viruses 88.2 8.4e-21   NR ULG00791.1 2915331 g19035 i0 63.2 0.812749003984064 68 25 81.3 0 244 41 13 80 ULG00791.1 hypothetical protein, partial [Escherichia phage D2] diamond 204 88.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Bievrevirus Escherichia phage D2
30329557 30329557 PRJNA482207_P_NODE_27692_length_243_cov_1.376471_g27582_i0 PRJNA482207 27692 243 1.376471 3.34482453 Caudoviricetes sp. 2832643 Viruses Viruses 49.3 3.27e-5   NR DAH93386.1 2832643 g27582 i0 56.4 0.481481481481481 39 17 48.1 0 241 125 34 72 DAH93386.1 MAG TPA: hypothetical protein, partial [Caudoviricetes sp.] diamond 117 49.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30487111 30487111 PRJNA482207_P_NODE_29573_length_242_cov_0.911243_g29463_i0 PRJNA482207 29573 242 0.911243 2.20520806 Moumouvirus Monve 1128131 Viruses Viruses 44.7 0.00755   NR AEX62409.1 1128131 g29463 i0 31.2 1.90909090909091 77 49 95.5 3 232 2 401 473 AEX62409.1 cysteinyl-tRNA synthetase [Moumouvirus Monve] diamond 462 44.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'Monve'
30992618 30992618 PRJNA482207_P_NODE_24694_length_246_cov_0.890173_g24584_i0 PRJNA482207 24694 246 0.890173 2.18982558 Cellulophaga phage Nekkels_1 2745692 Viruses Viruses 68.9 2.32e-11   NR YP_010357532.1 2745692 g24584 i0 76.3 0.463414634146341 38 9 46.3 0 133 246 1 38 YP_010357532.1 DNA primase/helicase [Cellulophaga phage Nekkels_1] diamond 114 68.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Assiduviridae Nekkelsvirus Nekkelsvirus Nekkels
31181792 31181792 PRJNA482207_P_NODE_21755_length_249_cov_0.875000_g21645_i0 PRJNA482207 21755 249 0.875 2.17875 Vibrio phage 1.242.O._1 1881235 Viruses Viruses 70.5 6.09e-13   NR AUR97566.1 1881235 g21645 i0 69 0.506024096385542 42 13 50.6 0 248 123 124 165 AUR97566.1 AP2/ERF domain protein [Vibrio phage 1.242.O._10N.261.54.B2] diamond 126 70.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage 1.242.O._10N.261.54.B2
31181798 31181798 PRJNA482207_P_NODE_29095_length_242_cov_0.911243_g28985_i0 PRJNA482207 29095 242 0.911243 2.20520806 Vibrio phage vB_ValP_IME271 2024229 Viruses Viruses 85.9 1.19e-18   NR ASR73830.1 2024229 g28985 i0 48.1 0.979338842975207 79 41 97.9 0 241 5 5 83 ASR73830.1 hypothetical protein [Vibrio phage vB_ValP_IME271] diamond 237 85.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_ValP_IME271
31814674 31814674 PRJNA482207_P_NODE_10617_length_323_cov_1.232000_g10507_i0 PRJNA482207 10617 323 1.232 3.97936 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 85.9 7.23e-17   NR UVF58820.1 3063761 g10507 i0 69.4 0.575851393188854 62 17 55.7 1 128 307 829 890 UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus] diamond 186 85.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
32668393 32668393 PRJNA482207_P_NODE_8240_length_352_cov_2.182796_g8130_i0 PRJNA482207 8240 352 2.182796 7.68344192 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 130 3.2399999999999996e-32   NR AVM87439.1 3063761 g8130 i0 50.8 1.05681818181818 124 54 99.7 1 2 352 1019 1142 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 372 130 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;