RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA482207", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA482207 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13201737 13201737 PRJNA482207_P_NODE_29291_length_242_cov_0.911243_g29181_i0 PRJNA482207 29291 242 0.911243 2.20520806 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 217 7.3e-52   NTclustered gi|2874254091|emb|OY970174.1| 171953 g29181 i0 83.333 78.8884297520661 240 35 98 3 1 237 1418785 1418548 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 19091 217 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
29855209 29855209 PRJNA482207_P_NODE_22311_length_249_cov_0.875000_g22201_i0 PRJNA482207 22311 249 0.875 2.17875 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 124 2.87e-32   NR HET6958192.1 2910147 g22201 i0 68.3 3.85542168674699 82 26 98.8 0 248 3 154 235 HET6958192.1 glycosyltransferase family 2 protein [Vicinamibacterales bacterium] diamond 960 124 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31372056 31372056 PRJNA482207_P_NODE_20856_length_250_cov_0.870056_g20746_i0 PRJNA482207 20856 250 0.870056 2.17514 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 65.1 5.68e-10   NR MEO7794486.1 2651171 g20746 i0 49.3 1.608 67 34 80.4 0 40 240 43 109 MEO7794486.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 402 65.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31688101 31688101 PRJNA482207_P_NODE_22777_length_248_cov_0.880000_g22667_i0 PRJNA482207 22777 248 0.88 2.1824 Holophagales bacterium 2478486 Bacteria Bacteria 43.9 0.0154   NR MCG8462123.1 2478486 g22667 i0 42.4 0.798387096774194 66 30 79.8 2 201 4 479 536 MCG8462123.1 tetratricopeptide repeat protein [Holophagales bacterium] diamond 198 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales     Holophagales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;