RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA482207", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA482207 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28907636 28907636 PRJNA482207_P_NODE_6208_length_393_cov_1.400000_g6098_i0 PRJNA482207 6208 393 1.4 5.502 Anaerolineae bacterium 2052143 Bacteria Bacteria 45.4 0.0177   NR MBC7223540.1 2052143 g6098 i0 37 0.557251908396947 73 43 55.7 1 355 137 82 151 MBC7223540.1 hypothetical protein [Anaerolineae bacterium] diamond 219 45.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29318283 29318283 PRJNA482207_P_NODE_19949_length_251_cov_0.865169_g19839_i0 PRJNA482207 19949 251 0.865169 2.17157419 Caldilineaceae bacterium 2614250 Bacteria Bacteria 49.3 1.03e-4   NR MCB0130117.1 2614250 g19839 i0 39.3 1.00398406374502 84 48 98 2 248 3 6 88 MCB0130117.1 copper chaperone PCu(A)C [Caldilineaceae bacterium] diamond 252 49.3 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
29475946 29475946 PRJNA482207_P_NODE_23710_length_247_cov_0.885057_g23600_i0 PRJNA482207 23710 247 0.885057 2.18609079 Caldilineaceae bacterium 2614250 Bacteria Bacteria 56.6 1.98e-7   NR MBP8292571.1 2614250 g23600 i0 51.5 1.7246963562753 68 33 82.6 0 3 206 72 139 MBP8292571.1 hypothetical protein [Caldilineaceae bacterium] diamond 426 56.6 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30297921 30297921 PRJNA482207_P_NODE_24352_length_247_cov_0.885057_g24242_i0 PRJNA482207 24352 247 0.885057 2.18609079 Caldilineaceae bacterium 2614250 Bacteria Bacteria 82 4.38e-16   NR MFN8465138.1 2614250 g24242 i0 51.3 3.78947368421053 80 39 97.2 0 247 8 304 383 MFN8465138.1 MFS transporter [Caldilineaceae bacterium] diamond 936 82 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;