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contig_metadata

12 rows where bioproject = "PRJNA482207" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA482207 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8100933 8100933 PRJNA482207_P_NODE_14087_length_291_cov_1.243119_g13977_i0 PRJNA482207 14087 291 1.243119 3.61747629 Tetraselmis suecica 270643 Plants Plants 527 3.67e-145   NTclustered gi|2314987506|ref|NC_067041.1| 270643 g13977 i0 99.313 117.343642611684 291 2 100 0 1 291 65444 65154 Tetraselmis suecica chloroplast, complete genome blastn 34147 527 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis suecica
9375900 9375900 PRJNA482207_P_NODE_27908_length_243_cov_0.905882_g27798_i0 PRJNA482207 27908 243 0.905882 2.20129326 Dunaliella tertiolecta 3047 Plants Plants 364 2.479999999999999e-96   NTclustered gi|371532840|gb|JQ039054.1| 3047 g27798 i0 94.85 106.609053497942 233 12 96 0 1 233 60 292 Dunaliella tertiolecta photosystem II protein D1 (psbA) mRNA, complete cds; plastid blastn 25906 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella tertiolecta
10651819 10651819 PRJNA482207_P_NODE_28169_length_243_cov_0.905882_g28059_i0 PRJNA482207 28169 243 0.905882 2.20129326 Dunaliella salina 3046 Plants Plants 322 1.51e-83   NTclustered gi|383930345|ref|NC_016732.1| 3046 g28059 i0 90.688 58.4650205761317 247 15 99 6 2 243 132938 132695 Dunaliella salina chloroplast, complete genome blastn 14207 322 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
13201647 13201647 PRJNA482207_P_NODE_24631_length_246_cov_0.890173_g24521_i0 PRJNA482207 24631 246 0.890173 2.18982558 Coccomyxa viridis 1274662 Plants Plants 95.1 1.47e-20   NR CAK0742420.1 1274662 g24521 i0 58.9 5.34146341463415 73 30 89 0 246 28 649 721 CAK0742420.1 hypothetical protein CVIRNUC_001395 [Coccomyxa viridis] diamond 1314 95.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
15750722 15750722 PRJNA482207_P_NODE_25933_length_245_cov_0.895349_g25823_i0 PRJNA482207 25933 245 0.895349 2.19360505 Picochlorum sp. BPE23 2696299 Plants Plants 103 1.38e-25   NR KAI8111277.1 2696299 g25823 i0 61.7 2.97551020408163 81 31 99.2 0 1 243 36 116 KAI8111277.1 hypothetical protein M9434_004849 [Picochlorum sp. BPE23] diamond 729 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
18948673 18948673 PRJNA482207_P_NODE_12135_length_308_cov_0.982979_g12025_i0 PRJNA482207 12135 308 0.982979 3.02757532 Dunaliella 3044 Plants Plants 211 4.48e-50   NTclustered gi|377774245|gb|JN797818.1| 3046 g12025 i0 100 37.2467532467532 114 0 37 0 195 308 77 190 Dunaliella sp. MBTD-CMFRI-S135 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast blastn 11472 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
19573747 19573747 PRJNA482207_P_NODE_20476_length_250_cov_0.870056_g20366_i0 PRJNA482207 20476 250 0.870056 2.17514 Tetradesmus dissociatus 113522 Plants Plants 453 5.31e-123   NTclustered gi|2661059218|gb|OR502667.1| 3073544 g20366 i0 100 148.66 245 0 98 0 1 245 83580 83336 Tetradesmus dissociatus f. oviformis strain SAG 5.95 chloroplast, complete genome blastn 37165 453 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus dissociatus
24674164 24674164 PRJNA482207_P_NODE_25900_length_245_cov_0.895349_g25790_i0 PRJNA482207 25900 245 0.895349 2.19360505 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 131 2.76e-34   NR KAH7623926.1 1650286 g25790 i0 82.7 2.97551020408163 81 14 99.2 0 245 3 42 122 KAH7623926.1 putative 60S ribosomal protein L23a [Chlorella desiccata (nom. nud.)] diamond 729 131 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27850319 27850319 PRJNA482207_P_NODE_25324_length_246_cov_0.890173_g25214_i0 PRJNA482207 25324 246 0.890173 2.18982558 Chlamydomonadales 3042 Plants Plants 102 2.3e-23   NR KXZ48886.1 33097 g25214 i0 67.9 4.95121951219512 81 25 97.6 1 244 5 218 298 KXZ48886.1 hypothetical protein GPECTOR_24g175 [Gonium pectorale] diamond 1218 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
28244657 28244657 PRJNA482207_P_NODE_19386_length_251_cov_0.865169_g19276_i0 PRJNA482207 19386 251 0.865169 2.17157419 Dunaliella salina 3046 Plants Plants 152 5.16e-44   NR KAF5842932.1 3046 g19276 i0 92.5 0.956175298804781 80 6 95.6 0 12 251 1 80 KAF5842932.1 light harvesting complex a protein [Dunaliella salina] diamond 240 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31308529 31308529 PRJNA482207_P_NODE_27215_length_244_cov_0.900585_g27105_i0 PRJNA482207 27215 244 0.900585 2.1974274 Dunaliella salina 3046 Plants Plants 140 5.8e-41   NR KAF5841389.1 3046 g27105 i0 97.4 0.934426229508197 76 2 93.4 0 2 229 63 138 KAF5841389.1 hypothetical protein DUNSADRAFT_13257 [Dunaliella salina] diamond 228 140 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31656332 31656332 PRJNA482207_P_NODE_18497_length_257_cov_0.760870_g18387_i0 PRJNA482207 18497 257 0.76087 1.9554359 Haematococcus lacustris 44745 Plants Plants 92.4 1.49e-19   NR KAJ9504907.1 44745 g18387 i0 47.6 47.3463035019455 84 44 98.1 0 254 3 648 731 KAJ9504907.1 hypothetical protein QJQ45_030485 [Haematococcus lacustris] diamond 12168 92.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;