RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA482207", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA482207 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6825531 6825531 PRJNA482207_P_NODE_21306_length_249_cov_1.619318_g21196_i0 PRJNA482207 21306 249 1.619318 4.03210182 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|149394719|gb|EF125701.1| 151077 g21196 i0 100 0.112449799196787 28 0 11 0 222 249 49 22 Chilodonella uncinata strain ATCC 50194 amidase-like gene, complete sequence; macronuclear blastn 28 52.8 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20849583 20849583 PRJNA482207_P_NODE_22917_length_248_cov_0.880000_g22807_i0 PRJNA482207 22917 248 0.88 2.1824 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|74039759|gb|DQ114962.1| 5936 g22807 i0 100 0.116935483870968 29 0 12 0 220 248 37 9 Moneuplotes crassus clone pEC14 putative MORN repeat protein (pEC14) gene, complete cds; macronuclear blastn 29 54.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
22124475 22124475 PRJNA482207_P_NODE_22918_length_248_cov_0.880000_g22808_i0 PRJNA482207 22918 248 0.88 2.1824 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 86.7 1.41e-17   NR CDW73426.1 5949 g22808 i0 71.6 0.810483870967742 67 19 81 0 203 3 543 609 CDW73426.1 abc transporter family protein [Stylonychia lemnae] diamond 201 86.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28086869 28086869 PRJNA482207_P_NODE_28485_length_243_cov_0.905882_g28375_i0 PRJNA482207 28485 243 0.905882 2.20129326 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 70.1 8.49e-12   NR CAD8057762.1 5886 g28375 i0 45.5 1.90123456790123 77 38 92.6 3 17 241 504 578 CAD8057762.1 unnamed protein product [Paramecium primaurelia] diamond 462 70.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
29050428 29050428 PRJNA482207_P_NODE_20508_length_250_cov_0.870056_g20398_i0 PRJNA482207 20508 250 0.870056 2.17514 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 87.4 6.98e-18   NR CAD8068133.1 65129 g20398 i0 56.8 5.388 74 30 88.8 1 9 230 213 284 CAD8068133.1 unnamed protein product [Paramecium sonneborni] diamond 1347 87.8 0.995444191343964 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
29791817 29791817 PRJNA482207_P_NODE_26471_length_245_cov_0.895349_g26361_i0 PRJNA482207 26471 245 0.895349 2.19360505 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 48.1 4.78e-4   NR CDW76837.1 5949 g26361 i0 81.5 0.330612244897959 27 5 33.1 0 85 5 162 188 CDW76837.1 UNKNOWN [Stylonychia lemnae] diamond 81 48.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30581590 30581590 PRJNA482207_P_NODE_29893_length_241_cov_0.916667_g29783_i0 PRJNA482207 29893 241 0.916667 2.20916747 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0199   NR KRX07088.1 266149 g29783 i0 38.3 1.00829875518672 81 49 99.6 1 240 1 493 573 KRX07088.1 hypothetical protein PPERSA_05252 [Pseudocohnilembus persalinus] diamond 243 43.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30834553 30834553 PRJNA482207_P_NODE_20514_length_250_cov_0.870056_g20404_i0 PRJNA482207 20514 250 0.870056 2.17514 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 57.8 1.85e-7   NR CAG9313763.1 1481888 g20404 i0 47.5 0.708 59 28 68.4 3 243 73 66 123 CAG9313763.1 unnamed protein product [Blepharisma stoltei] diamond 177 57.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30866091 30866091 PRJNA482207_P_NODE_25134_length_246_cov_0.890173_g25024_i0 PRJNA482207 25134 246 0.890173 2.18982558 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 81.6 6.55e-16   NR XP_004037034.1 5932 g25024 i0 65.5 1.31707317073171 55 19 67.1 0 61 225 321 375 XP_004037034.1 hypothetical protein IMG5_063030 [Ichthyophthirius multifiliis] diamond 324 81.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;