RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA482207", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA482207 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27265992 27265992 PRJNA482207_P_NODE_26383_length_245_cov_0.895349_g26273_i0 PRJNA482207 26383 245 0.895349 2.19360505 Pseudoloma neurophilia 146866 Fungi Fungi 174 3.67e-52   NR KRH92775.1 146866 g26273 i0 100 0.991836734693878 81 0 99.2 0 245 3 182 262 KRH92775.1 hypothetical protein M153_2800000189 [Pseudoloma neurophilia] diamond 243 174 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27929166 27929166 PRJNA482207_P_NODE_28945_length_242_cov_0.911243_g28835_i0 PRJNA482207 28945 242 0.911243 2.20520806 Pseudoloma neurophilia 146866 Fungi Fungi 112 4.41e-29   NR KRH91765.1 146866 g28835 i0 100 1.33884297520661 54 0 66.9 0 2 163 126 179 KRH91765.1 N-arginine dibasic convertase NRD1, Zn2+-dependent endopeptidase, insulinase superfamily, partial [Pseudoloma neurophilia] diamond 324 112 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29791819 29791819 PRJNA482207_P_NODE_29071_length_242_cov_0.911243_g28961_i0 PRJNA482207 29071 242 0.911243 2.20520806 Pseudoloma neurophilia 146866 Fungi Fungi 169 3.84e-48   NR KRH95264.1 146866 g28961 i0 100 0.991735537190083 80 0 99.2 0 1 240 300 379 KRH95264.1 lysine-tRNA synthetase [Pseudoloma neurophilia] diamond 240 169 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;