RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA482207" and tax_clade = "Discoba"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA482207 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1722733 1722733 PRJNA482207_P_NODE_2222_length_615_cov_1.664207_g2122_i0 PRJNA482207 2222 615 1.664207 10.23487305 Cruzella marina 140242 Euglenozoa other_Eukaryota 411 8.73e-110   NTclustered gi|29650463|gb|AY241967.1| 140242 g2122 i0 79.717 1.03414634146341 636 75 97 40 20 615 646 25 Cruzella marina kinetoplast minicircle, complete sequence blastn 636 411 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cruzella Cruzella marina
26981302 26981302 PRJNA482207_P_NODE_19442_length_251_cov_0.865169_g19332_i0 PRJNA482207 19442 251 0.865169 2.17157419 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 70.5 7.17e-12   NR KAJ9440328.1 91374 g19332 i0 52.2 3.29880478087649 69 31 82.5 1 212 6 1636 1702 KAJ9440328.1 hypothetical protein DIPPA_05769 [Diplonema papillatum] diamond 828 70.5 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29065899 29065899 PRJNA482207_P_NODE_22008_length_249_cov_0.875000_g21898_i0 PRJNA482207 22008 249 0.875 2.17875 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 42.7 0.0388   NR KAJ9454201.1 91374 g21898 i0 43.3 0.72289156626506 60 30 71.1 2 217 41 217 273 KAJ9454201.1 hypothetical protein DIPPA_32682 [Diplonema papillatum] diamond 180 42.7 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;