contig_metadata
8 rows where bioproject = "PRJNA482207" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4274992 | 4274992 | PRJNA482207_P_NODE_22664_length_248_cov_0.880000_g22554_i0 | PRJNA482207 | 22664 | 248 | 0.88 | 2.1824 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2621702180|emb|OY760177.1| | 2044595 | g22554 | i0 | 100 | 0.112903225806452 | 28 | 0 | 11 | 0 | 11 | 38 | 1666016 | 1665989 | MAG: Candidatus Gracilibacteria bacterium isolate ba77f91b-d06a-446b-8ae6-f296fa1be4ef genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 17025277 | 17025277 | PRJNA482207_P_NODE_23874_length_247_cov_0.885057_g23764_i0 | PRJNA482207 | 23874 | 247 | 0.885057 | 2.18609079 | Candidatus Babela massiliensis | 673862 | Bacteria | Bacteria | 374 | 4.189999999999998e-99 | NTclustered | gi|563405083|emb|HG793133.1| | 673862 | g23764 | i0 | 93.927 | 1 | 247 | 15 | 100 | 0 | 1 | 247 | 170271 | 170517 | Candidatus Babela massiliensis strain BABL1 complete genome | blastn | 247 | 374 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Babeliae | Candidatus Babeliales | Candidatus Babeliaceae | Candidatus Babela | Candidatus Babela massiliensis | |||
| 20849697 | 20849697 | PRJNA482207_P_NODE_29237_length_242_cov_0.911243_g29127_i0 | PRJNA482207 | 29237 | 242 | 0.911243 | 2.20520806 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 129 | 1.4599999999999998e-35 | NR | HEX4799343.1 | 2053589 | g29127 | i0 | 82.1 | 0.966942148760331 | 78 | 14 | 96.7 | 0 | 240 | 7 | 38 | 115 | HEX4799343.1 elongation factor Ts [Candidatus Paceibacterota bacterium] | diamond | 234 | 129 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 27139091 | 27139091 | PRJNA482207_P_NODE_21862_length_249_cov_0.875000_g21752_i0 | PRJNA482207 | 21862 | 249 | 0.875 | 2.17875 | Minisyncoccia bacterium | 3120121 | Bacteria | Bacteria | 137 | 7.31e-39 | NR | MFT5832353.1 | 3120121 | g21752 | i0 | 78 | 0.987951807228916 | 82 | 18 | 98.8 | 0 | 3 | 248 | 56 | 137 | MFT5832353.1 putative alpha/beta hydrolase family esterase [Minisyncoccia bacterium] | diamond | 246 | 137 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccia | Minisyncoccia bacterium | |||||
| 30455762 | 30455762 | PRJNA482207_P_NODE_23173_length_248_cov_0.880000_g23063_i0 | PRJNA482207 | 23173 | 248 | 0.88 | 2.1824 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 43.1 | 0.0281 | NR | MDR3548743.1 | 2053589 | g23063 | i0 | 60 | 0.362903225806452 | 30 | 12 | 36.3 | 0 | 43 | 132 | 93 | 122 | MDR3548743.1 reverse transcriptase [Candidatus Paceibacterota bacterium] | diamond | 90 | 43.1 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 30676443 | 30676443 | PRJNA482207_P_NODE_30293_length_241_cov_0.916667_g30183_i0 | PRJNA482207 | 30293 | 241 | 0.916667 | 2.20916747 | Candidatus Babeliaceae bacterium | 2545253 | Bacteria | Bacteria | 89 | 1.75e-18 | NR | HVW99438.1 | 2545253 | g30183 | i0 | 52.9 | 0.846473029045643 | 68 | 32 | 84.6 | 0 | 7 | 210 | 84 | 151 | HVW99438.1 DDE-type integrase/transposase/recombinase [Candidatus Babeliaceae bacterium] | diamond | 204 | 89 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Babeliae | Candidatus Babeliales | Candidatus Babeliaceae | Candidatus Babeliaceae bacterium | ||||
| 30708131 | 30708131 | PRJNA482207_P_NODE_28454_length_243_cov_0.905882_g28344_i0 | PRJNA482207 | 28454 | 243 | 0.905882 | 2.20129326 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 107 | 6.47e-25 | NR | MBY0537966.1 | 2052139 | g28344 | i0 | 58.8 | 0.987654320987654 | 80 | 33 | 98.8 | 0 | 2 | 241 | 775 | 854 | MBY0537966.1 ATP-dependent helicase [Patescibacteria group bacterium] | diamond | 240 | 107 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 32131267 | 32131267 | PRJNA482207_P_NODE_17278_length_266_cov_1.492228_g17168_i0 | PRJNA482207 | 17278 | 266 | 1.492228 | 3.96932648 | Candidatus Beckwithbacteria bacterium | 2053519 | Bacteria | Bacteria | 65.1 | 2.21e-11 | NR | NMC36244.1 | 2053519 | g17168 | i0 | 58.7 | 3.40601503759398 | 63 | 25 | 69.9 | 1 | 187 | 2 | 1 | 63 | NMC36244.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Candidatus Beckwithbacteria bacterium] | diamond | 906 | 65.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Beckwithiibacteriota | Candidatus Beckwithbacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;