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contig_metadata

29 rows where bioproject = "PRJNA478247" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA478247 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4274744 4274744 PRJNA478247_P_NODE_1764_length_270_cov_1.970954_g1658_i0 PRJNA478247 1764 270 1.970954 5.3215758 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 281 2.9000000000000007e-71   NTclustered gi|290992301|ref|XM_002678727.1| 5762 g1658 i0 89.908 0.807407407407407 218 22 81 0 1 218 128 345 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_32592), partial mRNA blastn 218 281 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5551418 5551418 PRJNA478247_P_NODE_2825_length_188_cov_2.654088_g2719_i0 PRJNA478247 2825 188 2.654088 4.98968544 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 220 4.17e-53   NTclustered gi|9742|emb|X12563.1| 5762 g2719 i0 88.235 22.9574468085106 187 18 97 3 6 188 26 212 Naegleria gruberi gene for alpha-tubulin (3) blastn 4316 220 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6825339 6825339 PRJNA478247_P_NODE_226_length_1046_cov_2.384464_g171_i0 PRJNA478247 226 1046 2.384464 24.94149344 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 1583 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g171 i0 94.168 22.2753346080306 1046 49 100 6 1 1046 5988 4955 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 23300 1583 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
7475145 7475145 PRJNA478247_P_NODE_466_length_662_cov_2.657188_g373_i0 PRJNA478247 466 662 2.657188 17.59058456 Naegleria 5761 Heterolobosea other_Eukaryota 917 0   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g373 i0 97.584 78.6631419939577 538 3 81 1 125 662 1881 1354 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 52075 917 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
8100854 8100854 PRJNA478247_P_NODE_2627_length_201_cov_1.709302_g2521_i0 PRJNA478247 2627 201 1.709302 3.43569702 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 202 1.6399999999999998e-47   NTclustered gi|290971770|ref|XM_002668606.1| 5762 g2521 i0 92.254 6.16417910447761 142 11 71 0 59 200 172 31 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60075), partial mRNA blastn 1239 202 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8750112 8750112 PRJNA478247_P_NODE_3107_length_172_cov_2.000000_g3001_i0 PRJNA478247 3107 172 2 3.44 Naegleria 5761 Heterolobosea other_Eukaryota 311 2.16e-80   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g3001 i0 99.415 99.4244186046512 171 1 99 0 2 172 288 458 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 17101 311 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
9375578 9375578 PRJNA478247_P_NODE_1188_length_360_cov_2.051360_g1082_i0 PRJNA478247 1188 360 2.05136 7.384896 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 470 7.95e-128   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1082 i0 90.137 22.4305555555556 365 30 100 5 1 360 3019 2656 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8075 470 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13201392 13201392 PRJNA478247_P_NODE_1871_length_257_cov_4.438596_g1765_i0 PRJNA478247 1871 257 4.438596 11.40719172 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 303 5.85e-78   NTclustered gi|290974050|ref|XM_002669714.1| 5762 g1765 i0 87.984 170.178988326848 258 29 100 2 1 257 767 511 Naegleria gruberi polyubiquitin (NAEGRDRAFT_83338), partial mRNA blastn 43736 303 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14476330 14476330 PRJNA478247_P_NODE_312_length_867_cov_2.857995_g239_i0 PRJNA478247 312 867 2.857995 24.77881665 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 1358 0   NTclustered gi|4321709|gb|AF058283.1|AF058283 5764 g239 i0 98.32 65.7704728950404 774 13 89 0 94 867 1215 442 Naegleria andersoni elongation factor 1 alpha (tef1) gene, partial cds blastn 57023 1358 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
15750414 15750414 PRJNA478247_P_NODE_2293_length_222_cov_1.740933_g2187_i0 PRJNA478247 2293 222 1.740933 3.86487126 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 117 6.88e-22   NTclustered gi|2031945705|emb|OD958456.1| 5763 g2187 i0 86.916 0.963963963963964 107 11 48 3 56 162 9941 9838 Naegleria fowleri Karachi_NF001 strain blastn 214 117 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18299345 18299345 PRJNA478247_P_NODE_2855_length_186_cov_2.541401_g2749_i0 PRJNA478247 2855 186 2.541401 4.72700586 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 322 1.1e-83   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g2749 i0 97.849 100 186 4 100 0 1 186 858 1043 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 18600 322 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
18299348 18299348 PRJNA478247_P_NODE_3335_length_161_cov_1.909091_g3229_i0 PRJNA478247 3335 161 1.909091 3.07363651 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 281 1.57e-71   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g3229 i0 98.148 100.136645962733 162 1 100 2 1 161 638 478 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 16122 281 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
18299349 18299349 PRJNA478247_P_NODE_3555_length_153_cov_1.927419_g3449_i0 PRJNA478247 3555 153 1.927419 2.94895107 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 255 8.900000000000001e-64   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g3449 i0 96.732 97.9477124183007 153 5 100 0 1 153 500 652 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 14986 255 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19573562 19573562 PRJNA478247_P_NODE_2976_length_179_cov_2.226667_g2870_i0 PRJNA478247 2976 179 2.226667 3.98573393 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 276 8.27e-70   NTclustered gi|290996126|ref|XM_002680588.1| 5762 g2870 i0 94.413 98.5754189944134 179 10 100 0 1 179 527 349 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55154), mRNA blastn 17645 276 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19573564 19573564 PRJNA478247_P_NODE_3576_length_152_cov_2.390244_g3470_i0 PRJNA478247 3576 152 2.390244 3.63317088 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 104 3.38e-18   NTclustered gi|290999912|ref|XM_002682478.1| 5762 g3470 i0 80.576 1.25657894736842 139 23 90 4 2 138 442 578 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_44250), partial mRNA blastn 191 104 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20223498 20223498 PRJNA478247_P_NODE_2736_length_193_cov_2.560976_g2630_i0 PRJNA478247 2736 193 2.560976 4.94268368 Naegleria 5761 Heterolobosea other_Eukaryota 294 2.5e-75   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2630 i0 94.271 10.4766839378238 192 11 99 0 2 193 5716 5525 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2022 294 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20849379 20849379 PRJNA478247_P_NODE_2637_length_200_cov_1.760234_g2531_i0 PRJNA478247 2637 200 1.760234 3.520468 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 326 9.27e-85   NTclustered gi|290973566|ref|XM_002669473.1| 5762 g2531 i0 96 41.75 200 8 100 0 1 200 1123 924 Naegleria gruberi beta-tubulin (NAEGRDRAFT_56391), partial mRNA blastn 8350 326 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20849382 20849382 PRJNA478247_P_NODE_337_length_834_cov_2.529193_g259_i0 PRJNA478247 337 834 2.529193 21.09346962 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 710 0   NTclustered gi|9738|emb|X12561.1| 5762 g259 i0 94.372 61.3345323741007 462 26 99 0 373 834 877 416 Naegleria gruberi mRNA for alpha-tubulin (1) blastn 51153 710 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22124223 22124223 PRJNA478247_P_NODE_1418_length_317_cov_2.885417_g1312_i0 PRJNA478247 1418 317 2.885417 9.14677189 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 132 9.89e-38   NR XP_002674291.1 5762 g1312 i0 69.4 4.94006309148265 85 26 80.4 0 280 26 1 85 XP_002674291.1 uncharacterized protein NAEGRDRAFT_56264 [Naegleria gruberi] diamond 1566 132 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23400026 23400026 PRJNA478247_P_NODE_1379_length_325_cov_2.939189_g1273_i0 PRJNA478247 1379 325 2.939189 9.55236425 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 529 1.1599999999999999e-145   NTclustered gi|290975864|ref|XM_002670616.1| 5762 g1273 i0 96 100.338461538462 325 13 100 0 1 325 30 354 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55913), mRNA blastn 32610 529 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25323396 25323396 PRJNA478247_P_NODE_2440_length_212_cov_2.967213_g2334_i0 PRJNA478247 2440 212 2.967213 6.29049156 Naegleria 5761 Heterolobosea other_Eukaryota 355 1.27e-93   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2334 i0 96.729 88.8066037735849 214 5 100 1 1 212 13 226 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 18827 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26759627 26759627 PRJNA478247_P_NODE_1521_length_303_cov_1.627737_g1415_i0 PRJNA478247 1521 303 1.627737 4.93204311 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 71.6 5.01e-12   NR XP_044546071.1 51637 g1415 i0 59.7 2.65346534653465 67 17 62.4 2 193 5 320 380 XP_044546071.1 uncharacterized protein C9374_007957 [Naegleria lovaniensis] diamond 804 71.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27234312 27234312 PRJNA478247_P_NODE_2963_length_180_cov_1.668874_g2857_i0 PRJNA478247 2963 180 1.668874 3.0039732 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 97.8 1.8299999999999994e-23   NR XP_044546126.1 51637 g2857 i0 79.7 0.983333333333333 59 12 98.3 0 4 180 1 59 XP_044546126.1 uncharacterized protein C9374_008012 [Naegleria lovaniensis] diamond 177 97.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28055265 28055265 PRJNA478247_P_NODE_2905_length_184_cov_1.167742_g2799_i0 PRJNA478247 2905 184 1.167742 2.14864528 Acrasis kona 1008807 Heterolobosea other_Eukaryota 75.1 5.11e-14   NR KAL0481438.1 1008807 g2799 i0 55.7 0.994565217391304 61 27 99.5 0 183 1 251 311 KAL0481438.1 hypothetical protein AKO1_012577 [Acrasis kona] diamond 183 75.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29223828 29223828 PRJNA478247_P_NODE_789_length_471_cov_8.914027_g684_i0 PRJNA478247 789 471 8.914027 41.98506717 Acrasis kona 1008807 Heterolobosea other_Eukaryota 89.7 1.96e-19   NR KAL0484069.1 1008807 g684 i0 39.1 2.40764331210191 110 66 70.1 1 370 41 43 151 KAL0484069.1 coactosin [Acrasis kona] diamond 1134 89.7 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30329545 30329545 PRJNA478247_P_NODE_2872_length_185_cov_2.512821_g2766_i0 PRJNA478247 2872 185 2.512821 4.64871885 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 107 7.71e-29   NR CAG4714691.1 5763 g2766 i0 78.7 0.989189189189189 61 13 98.9 0 183 1 12 72 CAG4714691.1 unnamed protein product [Naegleria fowleri] diamond 183 107 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30676436 30676436 PRJNA478247_P_NODE_73_length_1683_cov_7.877267_g46_i0 PRJNA478247 73 1683 7.877267 132.57440361 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 151 2.8099999999999997e-35   NR XP_002672528.1 5762 g46 i0 27.2 0.903743315508021 507 319 85 16 209 1639 74 560 XP_002672528.1 uncharacterized protein NAEGRDRAFT_59200 [Naegleria gruberi] diamond 1521 151 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32067672 32067672 PRJNA478247_P_NODE_3018_length_177_cov_1.702703_g2912_i0 PRJNA478247 3018 177 1.702703 3.01378431 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 45.8 0.00124   NR XP_002675861.1 5762 g2912 i0 55.8 0.728813559322034 43 19 72.9 0 176 48 271 313 XP_002675861.1 uncharacterized protein NAEGRDRAFT_68862 [Naegleria gruberi] diamond 129 45.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32415972 32415972 PRJNA478247_P_NODE_399_length_752_cov_5.526971_g313_i0 PRJNA478247 399 752 5.526971 41.56282192 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 136 1.7e-32   NR XP_002669434.1 5762 g313 i0 56.2 0.482712765957447 121 48 47.5 5 43 399 896 1013 XP_002669434.1 uncharacterized protein NAEGRDRAFT_82167 [Naegleria gruberi] diamond 363 136 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;