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contig_metadata

20 rows where bioproject = "PRJNA478247" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA478247 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
447832 447832 PRJNA478247_P_NODE_361_length_795_cov_2.212794_g279_i0 PRJNA478247 361 795 2.212794 17.5917123 Coccomyxa subellipsoidea 248742 Plants Plants 121 4.47e-27   NR KAK9908763.1 248742 g279 i0 53.1 1.27924528301887 113 50 41.5 1 586 257 211 323 KAK9908763.1 hypothetical protein WJX75_002528 [Coccomyxa subellipsoidea] diamond 1017 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
1722522 1722522 PRJNA478247_P_NODE_162_length_1172_cov_4.269466_g119_i0 PRJNA478247 162 1172 4.269466 50.03814152 Eukaryota 2759 Plants Plants 381 5.23e-127   NR KAI3431832.1 3077 g119 i0 57.7 60.3993174061433 369 147 93.4 5 1154 60 1 364 KAI3431832.1 hypothetical protein D9Q98_010585 [Chlorella vulgaris] diamond 70788 384 0.9921875 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
5551420 5551420 PRJNA478247_P_NODE_3585_length_152_cov_1.699187_g3479_i0 PRJNA478247 3585 152 1.699187 2.58276424 Stichococcus bacillaris 37433 Plants Plants 248 1.48e-61   NTclustered gi|115430291|emb|AM260460.1| 37433 g3479 i0 96.053 99.9736842105263 152 6 100 0 1 152 64 215 Stichococcus bacillaris partial 26S rRNA gene, strain SAG 379-1b blastn 15196 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
8100855 8100855 PRJNA478247_P_NODE_3247_length_165_cov_2.007353_g3141_i0 PRJNA478247 3247 165 2.007353 3.31213245 Eukaryota 2759 Plants Plants 100 1.07e-24   NR GHP08779.1 41880 g3141 i0 83.6 7 55 9 100 0 1 165 45 99 GHP08779.1 Rab-7 protein [Pycnococcus provasolii] diamond 1155 101 0.99009900990099 Eukaryota   Viridiplantae Chlorophyta Pseudoscourfieldiophyceae Pseudoscourfieldiales Pycnococcaceae Pycnococcus Pycnococcus provasolii
9375589 9375589 PRJNA478247_P_NODE_868_length_446_cov_2.527578_g763_i0 PRJNA478247 868 446 2.527578 11.27299788 Haematococcus lacustris 44745 Plants Plants 186 5.4199999999999984e-55   NR GFH24957.1 44745 g763 i0 61.2 7.88340807174888 147 57 98.9 0 445 5 162 308 GFH24957.1 cyclin N-terminal domain-containing protein [Haematococcus lacustris] diamond 3516 186 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
16399726 16399726 PRJNA478247_P_NODE_2533_length_206_cov_2.457627_g2427_i0 PRJNA478247 2533 206 2.457627 5.06271162 Eukaryota 2759 Plants Plants 259 9.89e-65   NTclustered gi|2082262574|ref|XM_001694020.2| 3055 g2427 i0 89.32 99.0291262135922 206 22 100 0 1 206 304 509 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g542250v5), mRNA blastn 20400 261 0.992337164750958 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17025038 17025038 PRJNA478247_P_NODE_1134_length_373_cov_4.517442_g1028_i0 PRJNA478247 1134 373 4.517442 16.85005866 Valonia macrophysa 432605 Plants Plants 449 1.0799999999999998e-121   NTclustered gi|969822378|gb|KT950956.1| 432605 g1028 i0 89.548 93.0160857908847 354 37 95 0 20 373 12 365 Valonia macrophysa isolate 1528 actin gene, partial cds blastn 34695 449 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Valoniaceae Valonia Valonia macrophysa
22774131 22774131 PRJNA478247_P_NODE_2818_length_189_cov_1.618750_g2712_i0 PRJNA478247 2818 189 1.61875 3.0594375 Eukaryota 2759 Plants Plants 104 4.41e-18   NTclustered gi|2082259818|ref|XM_001690833.2| 3055 g2712 i0 85.714 1.92063492063492 98 14 52 0 60 157 197 100 Chlamydomonas reinhardtii ribosomal protein L18 (CHLRE_12g512600v5), mRNA blastn 363 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
27060755 27060755 PRJNA478247_P_NODE_2082_length_239_cov_2.600000_g1976_i0 PRJNA478247 2082 239 2.6 6.214 Eukaryota 2759 Plants Plants 102 9.07e-27   NR KAL0020376.1 2905654 g1976 i0 70.4 5.52301255230125 71 21 89.1 0 16 228 1 71 KAL0020376.1 hypothetical protein WJX79_009890 [Trebouxia sp. C0005] diamond 1320 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005
27139085 27139085 PRJNA478247_P_NODE_1762_length_270_cov_2.597510_g1656_i0 PRJNA478247 1762 270 2.59751 7.013277 Symbiochloris irregularis 706552 Plants Plants 99.4 6.04e-25   NR KAK9808445.1 706552 g1656 i0 64.1 1.71111111111111 78 26 85.6 2 268 38 17 93 KAK9808445.1 hypothetical protein WJX73_006634 [Symbiochloris irregularis] diamond 462 99.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
27676762 27676762 PRJNA478247_P_NODE_3044_length_175_cov_2.445205_g2938_i0 PRJNA478247 3044 175 2.445205 4.27910875 Cymbomonas tetramitiformis 36881 Plants Plants 44.7 0.0032   NR KAK3244880.1 36881 g2938 i0 43.2 0.754285714285714 44 23 75.4 1 40 171 281 322 KAK3244880.1 hypothetical protein CYMTET_45530 [Cymbomonas tetramitiformis] diamond 132 44.7 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
28718541 28718541 PRJNA478247_P_NODE_807_length_467_cov_2.184932_g702_i0 PRJNA478247 807 467 2.184932 10.20363244 Tetradesmus obliquus 3088 Plants Plants 151 2.41e-39   NR WIA13321.1 3088 g702 i0 54.7 1.81798715203426 139 62 89.3 1 433 17 469 606 WIA13321.1 hypothetical protein OEZ85_006904 [Tetradesmus obliquus] diamond 849 151 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29902950 29902950 PRJNA478247_P_NODE_371_length_783_cov_5.588859_g287_i0 PRJNA478247 371 783 5.588859 43.76076597 Eukaryota 2759 Plants Plants 273 8.369999999999999e-89   NR KAK2080821.1 3111 g287 i0 59.7 11.2222222222222 236 94 90.4 1 42 749 3 237 KAK2080821.1 60S ribosomal protein L7B [Prototheca wickerhamii] diamond 8787 275 0.992727272727273 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29997742 29997742 PRJNA478247_P_NODE_2231_length_227_cov_1.570707_g2125_i0 PRJNA478247 2231 227 1.570707 3.56550489 Eukaryota 2759 Plants Plants 70.9 3.77e-12   NR KAJ9533139.1 44745 g2125 i0 57.4 23.511013215859 68 21 79.3 1 180 1 4 71 KAJ9533139.1 hypothetical protein QJQ45_018232 [Haematococcus lacustris] diamond 5337 71.2 0.995786516853933 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30107782 30107782 PRJNA478247_P_NODE_3432_length_158_cov_1.232558_g3326_i0 PRJNA478247 3432 158 1.232558 1.94744164 Dunaliella salina 3046 Plants Plants 43.1 0.00443   NR KAF5829452.1 3046 g3326 i0 58.1 2.86708860759494 31 13 58.9 0 147 55 82 112 KAF5829452.1 ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit [Dunaliella salina] diamond 453 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
30202423 30202423 PRJNA478247_P_NODE_352_length_804_cov_3.698065_g272_i0 PRJNA478247 352 804 3.698065 29.7324426 Scenedesmus sp. PABB 2909984 Plants Plants 358 6.14e-116   NR KAF8059167.1 2742167 g272 i0 64.3 28.7686567164179 258 92 96.3 0 15 788 453 710 KAF8059167.1 RPS4 [Scenedesmus sp. PABB004] diamond 23130 358 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
30882203 30882203 PRJNA478247_P_NODE_514_length_631_cov_3.893688_g418_i0 PRJNA478247 514 631 3.893688 24.56917128 Eukaryota 2759 Plants Plants 298 7.8e-91   NR PRW60132.1 3076 g418 i0 73.6 32.4960380348653 201 52 95.1 1 31 630 1 201 PRW60132.1 60S ribosomal L15 [Chlorella sorokiniana] diamond 20505 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31688090 31688090 PRJNA478247_P_NODE_477_length_652_cov_2.804173_g384_i0 PRJNA478247 477 652 2.804173 18.28320796 Cymbomonas tetramitiformis 36881 Plants Plants 76.6 3.23e-12   NR KAK3276030.1 36881 g384 i0 28.1 1.06288343558282 231 107 97.1 8 8 640 236 427 KAK3276030.1 hypothetical protein CYMTET_15873 [Cymbomonas tetramitiformis] diamond 693 76.6 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
31782861 31782861 PRJNA478247_P_NODE_1017_length_401_cov_3.602151_g911_i0 PRJNA478247 1017 401 3.602151 14.44462551 Monoraphidium minutum 39955 Plants Plants 44.7 0.00914   NR KAI8470570.1 39955 g911 i0 58.3 0.269326683291771 36 15 26.9 0 272 165 2 37 KAI8470570.1 MAG: hypothetical protein J3K34DRAFT_468978 [Monoraphidium minutum] diamond 108 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
32731523 32731523 PRJNA478247_P_NODE_100_length_1455_cov_4.359748_g66_i0 PRJNA478247 100 1455 4.359748 63.4343334 Micractinium sp. CCAP 211/92 554058 Plants Plants 81.3 2.68e-12   NR KAL4435574.1 554058 g66 i0 28.6 1.68659793814433 262 141 49.9 9 1416 691 246 481 KAL4435574.1 hypothetical protein ABPG77_002537 [Micractinium sp. CCAP 211/92] diamond 2454 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;