RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA478247", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 1 ✖

tax_kingdom 1

  • Fungi · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA478247 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31909595 31909595 PRJNA478247_P_NODE_2577_length_204_cov_1.502857_g2471_i0 PRJNA478247 2577 204 1.502857 3.06582828 Mitosporidium daphniae 1485682 Fungi Fungi 100 9.08e-24   NR XP_013238026.1 1485682 g2471 i0 76.1 0.985294117647059 67 16 98.5 0 2 202 137 203 XP_013238026.1 40S ribosomal protein S1 [Mitosporidium daphniae] diamond 201 100 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;