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contig_metadata

3 rows where bioproject = "PRJNA478247", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA478247 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1722523 1722523 PRJNA478247_P_NODE_2002_length_246_cov_2.741935_g1896_i0 PRJNA478247 2002 246 2.741935 6.7451601 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 268 2.03e-67   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1896 i0 86.64 74.260162601626 247 27 100 4 1 246 2673 2914 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18268 268 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
17025040 17025040 PRJNA478247_P_NODE_2454_length_211_cov_2.500000_g2348_i0 PRJNA478247 2454 211 2.5 5.275 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 272 1.3099999999999999e-68   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2348 i0 92.746 93 193 7 91 4 1 193 3660 3845 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19623 272 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23400028 23400028 PRJNA478247_P_NODE_1699_length_278_cov_3.224900_g1593_i0 PRJNA478247 1699 278 3.2249 8.965222 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 453 5.999999999999999e-123   NTclustered gi|219524904|gb|EU709267.1| 175275 g1593 i0 96.703 93.7841726618705 273 8 98 1 6 278 159 430 Uncultured cercozoan isolate AH18p87t8 18S ribosomal RNA gene, partial sequence blastn 26072 453 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;