RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA474911" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA474911 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20849257 20849257 PRJNA474911_P_NODE_3837_length_301_cov_0.975000_g3710_i0 PRJNA474911 3837 301 0.975 2.93475 Syncephalis pseudoplumigaleata 1712513 Fungi Fungi 146 8.85e-43   NR RKP23642.1 1712513 g3710 i0 79.1 1.87375415282392 91 19 90.7 0 275 3 7 97 RKP23642.1 ribosomal protein rps15 [Syncephalis pseudoplumigaleata] diamond 564 146 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis pseudoplumigaleata
30487099 30487099 PRJNA474911_P_NODE_6453_length_219_cov_1.215190_g6326_i0 PRJNA474911 6453 219 1.21519 2.6612661 Ramicandelaber brevisporus 304332 Fungi Fungi 128 1.21e-33   NR KAI8868120.1 304332 g6326 i0 83.3 3.94520547945205 72 12 98.6 0 217 2 172 243 KAI8868120.1 hypothetical protein GQ42DRAFT_46942 [Ramicandelaber brevisporus] diamond 864 128 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;