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contig_metadata

22 rows where bioproject = "PRJNA474911" and tax_phylum = "Streptophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA474911 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1097069 1097069 PRJNA474911_P_NODE_2901_length_357_cov_3.783784_g2775_i0 PRJNA474911 2901 357 3.783784 13.50810888 Arachis 3817 Plants Plants 654 0   NTclustered gi|1666234238|ref|XR_003816680.1| 3818 g2775 i0 99.721 100.280112044818 358 0 100 1 1 357 2197 1840 PREDICTED: Arachis hypogaea 28S ribosomal RNA (LOC114926237), rRNA blastn 35800 654 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea
1722394 1722394 PRJNA474911_P_NODE_6022_length_228_cov_8.473054_g5895_i0 PRJNA474911 6022 228 8.473054 19.31856312 Solanum tuberosum 4113 Plants Plants 422 1.34e-113   NTclustered gi|971579642|ref|XR_001471816.1| 4113 g5895 i0 100 100 228 0 100 0 1 228 42 269 PREDICTED: Solanum tuberosum uncharacterized LOC107058159 (LOC107058159), ncRNA blastn 22800 422 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
2372558 2372558 PRJNA474911_P_NODE_2522_length_389_cov_4.402439_g2396_i0 PRJNA474911 2522 389 4.402439 17.12548771 Magnoliopsida 3398 Plants Plants 691 0   NTclustered gi|2839189697|ref|XR_011219724.1| 4081 g2396 i0 98.715 1132.23136246787 389 5 100 0 1 389 1870 1482 PREDICTED: Solanum lycopersicum 28S ribosomal RNA (LOC138347010), rRNA blastn 440438 697 0.991391678622669 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
2998367 2998367 PRJNA474911_P_NODE_7943_length_203_cov_0.901408_g7816_i0 PRJNA474911 7943 203 0.901408 1.82985824 Lolium rigidum 89674 Plants Plants 370 4.3e-98   NTclustered gi|2212483262|ref|XM_047224862.1| 89674 g7816 i0 99.507 6 203 1 100 0 1 203 601 803 PREDICTED: Lolium rigidum disease resistance protein RGA2-like (LOC124691572), transcript variant X6, mRNA blastn 1218 370 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium rigidum
3648205 3648205 PRJNA474911_P_NODE_3603_length_313_cov_8.873016_g3477_i0 PRJNA474911 3603 313 8.873016 27.77254008 Eukaryota 2759 Plants Plants 579 1.0899999999999999e-160   NTclustered gi|2217019617|ref|XR_007051663.1| 4072 g3477 i0 100 101 313 0 100 0 1 313 733 1045 PREDICTED: Capsicum annuum 18S ribosomal RNA (LOC124895330), rRNA blastn 31613 579 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
4925221 4925221 PRJNA474911_P_NODE_6844_length_211_cov_1.280000_g6717_i0 PRJNA474911 6844 211 1.28 2.7008 Eukaryota 2759 Plants Plants 58.4 3.98e-4   NTclustered gi|1063459948|ref|XM_018118745.1| 3641 g6717 i0 100 32.6255924170616 31 0 15 0 178 208 1681 1711 PREDICTED: Theobroma cacao uncharacterized CRM domain-containing protein At3g25440, chloroplastic (LOC18612619), transcript variant X1, mRNA blastn 6884 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Theobroma Theobroma cacao
8100719 8100719 PRJNA474911_P_NODE_7367_length_207_cov_0.876712_g7240_i0 PRJNA474911 7367 207 0.876712 1.81479384 Magnoliopsida 3398 Plants Plants 108 1.53e-25   NR KAK9683990.1 3572 g7240 i0 73.1 24.3188405797101 67 18 97.1 0 6 206 295 361 KAK9683990.1 hypothetical protein RND81_10G179400 [Saponaria officinalis] diamond 5034 108 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Saponaria Saponaria officinalis
11300311 11300311 PRJNA474911_P_NODE_5869_length_232_cov_2.695906_g5742_i0 PRJNA474911 5869 232 2.695906 6.25450192 Solanum 4107 Plants Plants 429 8.2e-116   NTclustered gi|2839189697|ref|XR_011219724.1| 4081 g5742 i0 100 100 232 0 100 0 1 232 2646 2415 PREDICTED: Solanum lycopersicum 28S ribosomal RNA (LOC138347010), rRNA blastn 23200 429 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
12576055 12576055 PRJNA474911_P_NODE_6870_length_210_cov_9.134228_g6743_i0 PRJNA474911 6870 210 9.134228 19.1818788 Magnoliopsida 3398 Plants Plants 385 1.5999999999999995e-102   NTclustered gi|2646016675|ref|XR_009883389.1| 3486 g6743 i0 100 99.0571428571429 208 0 99 0 1 208 1435 1642 PREDICTED: Humulus lupulus 18S ribosomal RNA (LOC133811861), rRNA blastn 20802 388 0.992268041237113 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
12576058 12576058 PRJNA474911_P_NODE_7570_length_205_cov_1.555556_g7443_i0 PRJNA474911 7570 205 1.555556 3.1888898 Magnoliopsida 3398 Plants Plants 379 7.229999999999999e-101   NTclustered gi|1502965506|gb|MH603429.1| 4634 g7443 i0 100 195 205 0 100 0 1 205 110175 110379 Monocostus uniflorus voucher Zomlefer et al 2337 (FTG, GA, NY) isolate 2000-894H plastid, partial genome blastn 39975 379 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Costaceae Monocostus Monocostus uniflorus
15125022 15125022 PRJNA474911_P_NODE_5392_length_244_cov_2.098361_g5265_i0 PRJNA474911 5392 244 2.098361 5.12000084 Myrtaceae 3931 Plants Plants 54.7 0.006   NTclustered gi|2577862750|ref|NC_082025.1| 178175 g5265 i0 100 4.86885245901639 29 0 12 0 25 53 9330 9302 Syzygium australe chloroplast, complete genome blastn 1188 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Myrtaceae Syzygium Syzygium australe
15125024 15125024 PRJNA474911_P_NODE_5532_length_240_cov_1.072626_g5405_i0 PRJNA474911 5532 240 1.072626 2.5743024 Selaginella moellendorffii 88036 Plants Plants 92.4 6.1e-20   NR XP_002985543.1 88036 g5405 i0 60.6 4.625 71 28 88.8 0 213 1 181 251 XP_002985543.1 obg-like ATPase 1 [Selaginella moellendorffii] diamond 1110 92.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Selaginellales Selaginellaceae Selaginella Selaginella moellendorffii
16399661 16399661 PRJNA474911_P_NODE_7473_length_206_cov_0.882759_g7346_i0 PRJNA474911 7473 206 0.882759 1.81848354 Poaceae 4479 Plants Plants 52.8 0.018   NTclustered gi|1897958810|ref|XR_004853261.1| 4577 g7346 i0 100 0.679611650485437 28 0 14 0 152 179 182 209 PREDICTED: Zea mays uncharacterized lncRNA (LOC118473579), transcript variant X2, ncRNA blastn 140 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
17024903 17024903 PRJNA474911_P_NODE_7354_length_207_cov_0.876712_g7227_i0 PRJNA474911 7354 207 0.876712 1.81479384 Magnoliopsida 3398 Plants Plants 114 8.72e-31   NR XP_062169893.1 3517 g7227 i0 75.4 7 69 17 100 0 1 207 28 96 XP_062169893.1 small ribosomal subunit protein eS19x [Alnus glutinosa] diamond 1449 114 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
22124082 22124082 PRJNA474911_P_NODE_2818_length_365_cov_2.855263_g2692_i0 PRJNA474911 2818 365 2.855263 10.42170995 Medicago truncatula 3880 Plants Plants 52.8 0.035   NTclustered gi|164498918|gb|AC183430.31| 3880 g2692 i0 100 0.23013698630137 28 0 8 0 125 152 89972 89999 Medicago truncatula chromosome 8 clone mth2-176i20, complete sequence blastn 84 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Medicago Medicago truncatula
23399871 23399871 PRJNA474911_P_NODE_4159_length_286_cov_1.133333_g4032_i0 PRJNA474911 4159 286 1.133333 3.24133238 Cucumis sativus 3659 Plants Plants 228 4.0899999999999984e-55   NTclustered gi|1784860984|ref|XM_004138916.3| 3659 g4032 i0 88.021 66.8986013986014 192 23 67 0 1 192 1038 847 PREDICTED: Cucumis sativus elongation factor 1-alpha (EF1), mRNA blastn 19133 228 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis sativus
29019024 29019024 PRJNA474911_P_NODE_7168_length_208_cov_0.870748_g7041_i0 PRJNA474911 7168 208 0.870748 1.81115584 Asteraceae 4210 Plants Plants 53.9 2.64e-6   NR XP_023756589.1 4236 g7041 i0 52.9 5.8125 51 24 73.6 0 200 48 972 1022 XP_023756589.1 uncharacterized protein LOC111905146 [Lactuca sativa] diamond 1209 54.3 0.992633517495396 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca sativa
29065894 29065894 PRJNA474911_P_NODE_8268_length_201_cov_0.914286_g8141_i0 PRJNA474911 8268 201 0.914286 1.83771486 Striga asiatica 4170 Plants Plants 84.7 3.01e-19   NR GER57402.1 4170 g8141 i0 71.2 1.80597014925373 59 17 88.1 0 182 6 4 62 GER57402.1 60S ribosomal protein L31 [Striga asiatica] diamond 363 84.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Striga Striga asiatica
29871268 29871268 PRJNA474911_P_NODE_2011_length_440_cov_1.823219_g1886_i0 PRJNA474911 2011 440 1.823219 8.0221636 Eukaryota 2759 Plants Plants 157 7.56e-45   NR BBG98548.1 3755 g1886 i0 61.4 49.9704545454545 140 53 95.5 1 440 21 28 166 BBG98548.1 Translation protein SH3-like family protein [Prunus dulcis] diamond 21987 158 0.993670886075949 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
30534670 30534670 PRJNA474911_P_NODE_4813_length_262_cov_1.258706_g4686_i0 PRJNA474911 4813 262 1.258706 3.29780972 Eukaryota 2759 Plants Plants 82 5.98e-18   NR XP_024369179.1 3218 g4686 i0 58 9.76717557251908 88 34 97.3 2 256 2 4 91 XP_024369179.1 60S ribosomal protein L36-2-like [Physcomitrium patens] diamond 2559 82 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
30771540 30771540 PRJNA474911_P_NODE_7934_length_203_cov_0.901408_g7807_i0 PRJNA474911 7934 203 0.901408 1.82985824 Oryza sativa Japonica Group 39947 Plants Plants 97.4 3.71e-24   NR BAF17818.2 39947 g7807 i0 70.1 6.91625615763547 67 20 99 0 1 201 47 113 BAF17818.2 Os05g0490800, partial [Oryza sativa Japonica Group] diamond 1404 97.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
32305689 32305689 PRJNA474911_P_NODE_4339_length_279_cov_1.628440_g4212_i0 PRJNA474911 4339 279 1.62844 4.5433476 Eukaryota 2759 Plants Plants 101 8.52e-25   NR KAB1201704.1 262757 g4212 i0 56.3 2.96774193548387 96 35 100 3 279 1 58 149 KAB1201704.1 60S ribosomal protein L21-2 [Morella rubra] diamond 828 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Myricaceae Morella Morella rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;