RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA474911", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA474911 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26791520 26791520 PRJNA474911_P_NODE_1821_length_467_cov_1.886700_g1697_i0 PRJNA474911 1821 467 1.8867 8.810889 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 53.5 5.53e-5   NR CAF1634619.1 1234261 g1697 i0 41.9 1.11777301927195 86 45 54.6 3 211 465 131 212 CAF1634619.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 522 53.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
27929156 27929156 PRJNA474911_P_NODE_4885_length_260_cov_1.286432_g4758_i0 PRJNA474911 4885 260 1.286432 3.3447232 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 64.7 9.41e-11   NR CAF1128076.1 2762511 g4758 i0 38.5 2.36538461538462 78 47 88.8 1 231 1 26 103 CAF1128076.1 unnamed protein product [Rotaria sp. Silwood1] diamond 615 64.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;