RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA474911", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA474911 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1722386 1722386 PRJNA474911_P_NODE_3822_length_302_cov_1.327801_g3695_i0 PRJNA474911 3822 302 1.327801 4.00995902 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.028   NTclustered gi|1160559030|ref|XM_020577619.1| 670386 g3695 i0 100 0.0927152317880795 28 0 9 0 236 263 514 541 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17024897 17024897 PRJNA474911_P_NODE_3454_length_322_cov_1.164751_g3328_i0 PRJNA474911 3454 322 1.164751 3.75049822 Rhizomastix varia 1745347 Evosea other_Eukaryota 327 4.48e-85   NTclustered gi|944556463|gb|KP343611.1| 1745347 g3328 i0 85.22 99.3478260869565 318 47 99 0 5 322 696 379 Rhizomastix varia strain FBAN clone 2 actin gene, partial cds blastn 31990 327 1 Eukaryota Amoebozoa   Evosea       Rhizomastix Rhizomastix varia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;