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contig_metadata

33 rows where bioproject = "PRJNA474426" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 33 ✖

bioproject 1

  • PRJNA474426 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5551196 5551196 PRJNA474426_P_NODE_36245_length_162_cov_1.442478_g36040_i0 PRJNA474426 36245 162 1.442478 2.33681436 uncultured archaeon 115547 Archaea Archaea 86.1 1.33e-12   NTclustered gi|765560216|gb|KP308717.1| 115547 g36040 i0 84.884 0.530864197530864 86 12 53 1 66 151 8328 8244 Uncultured archaeon clone gwa2_scaffold_39027 genomic sequence blastn 86 86.1 1 Archaea               uncultured archaeon
20849044 20849044 PRJNA474426_P_NODE_14077_length_278_cov_1.816594_g13872_i0 PRJNA474426 14077 278 1.816594 5.05013132 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 412 1.0199999999999999e-110   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g13872 i0 93.502 1.99280575539568 277 18 99 0 1 277 1307016 1307292 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 554 412 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
26854984 26854984 PRJNA474426_P_NODE_19981_length_224_cov_0.880000_g19776_i0 PRJNA474426 19981 224 0.88 1.9712 Methanosarcina sp. 2213 Archaea Archaea 87 6.81e-18   NR HET8687757.1 2213 g19776 i0 51.4 0.964285714285714 72 34 95.1 1 213 1 353 424 HET8687757.1 toprim domain-containing protein [Methanosarcina sp.] diamond 216 87 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27139082 27139082 PRJNA474426_P_NODE_23902_length_201_cov_1.026316_g23697_i0 PRJNA474426 23902 201 1.026316 2.06289516 archaeon 1906665 Archaea Archaea 47.8 3.83e-4   NR NCQ51940.1 1906665 g23697 i0 55 1.19402985074627 40 18 59.7 0 123 4 2 41 NCQ51940.1 hypothetical protein [archaeon] diamond 240 47.8 1 Archaea               archaeon
27218550 27218550 PRJNA474426_P_NODE_24542_length_197_cov_2.209459_g24337_i0 PRJNA474426 24542 197 2.209459 4.35263423 Nanobdellati 1783276 Archaea Archaea 57.4 1.36e-7   NR MFH1065187.1 2026764 g24337 i0 66.7 3.95939086294416 36 12 54.8 0 83 190 125 160 MFH1065187.1 B12-binding domain-containing radical SAM protein [Nanoarchaeota archaeon] diamond 780 57.4 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27360926 27360926 PRJNA474426_P_NODE_16603_length_251_cov_2.183168_g16398_i0 PRJNA474426 16603 251 2.183168 5.47975168 archaeon 1906665 Archaea Archaea 112 7.43e-28   NR NCQ51808.1 1906665 g16398 i0 66.3 0.956175298804781 80 27 95.6 0 8 247 88 167 NCQ51808.1 hypothetical protein [archaeon] diamond 240 112 1 Archaea               archaeon
27613503 27613503 PRJNA474426_P_NODE_2224_length_662_cov_4.024470_g2073_i0 PRJNA474426 2224 662 4.02447 26.6419914 Nitrosarchaeum sp. 2026886 Archaea Archaea 74.3 1.11e-13   NR MBP0119603.1 2026886 g2073 i0 63.1 0.294561933534743 65 22 29.5 1 494 300 1 63 MBP0119603.1 hypothetical protein [Nitrosarchaeum sp.] diamond 195 74.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
28118418 28118418 PRJNA474426_P_NODE_28945_length_179_cov_1.415385_g28740_i0 PRJNA474426 28945 179 1.415385 2.53353915 Nanobdellota archaeon 2026764 Archaea Archaea 104 5.76e-25   NR MDO8510951.1 2026764 g28740 i0 92.9 0.93854748603352 56 4 93.9 0 179 12 10 65 MDO8510951.1 rhodanese-related sulfurtransferase [Nanoarchaeota archaeon] diamond 168 104 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28244645 28244645 PRJNA474426_P_NODE_18546_length_234_cov_1.421622_g18341_i0 PRJNA474426 18546 234 1.421622 3.32659548 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 47 0.00102   NR HIJ11996.1 2026803 g18341 i0 45.2 0.538461538461538 42 23 53.8 0 155 30 367 408 HIJ11996.1 PD-(D/E)XK nuclease family protein [Candidatus Woesearchaeota archaeon] diamond 126 47 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28244649 28244649 PRJNA474426_P_NODE_37406_length_155_cov_2.179245_g37201_i0 PRJNA474426 37406 155 2.179245 3.37782975 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 58.9 2.16e-8   NR MBS3106950.1 2026803 g37201 i0 60 1.74193548387097 45 18 87.1 0 154 20 475 519 MBS3106950.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 270 58.9 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28466018 28466018 PRJNA474426_P_NODE_7526_length_394_cov_1.333333_g7322_i0 PRJNA474426 7526 394 1.333333 5.25333202 Ignisphaera sp. 2268142 Archaea Archaea 158 5.139999999999999e-42   NR MCI4437813.1 2268142 g7322 i0 67.8 0.875634517766497 115 37 87.6 0 44 388 673 787 MCI4437813.1 phage tail sheath subtilisin-like domain-containing protein [Ignisphaera sp.] diamond 345 158 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.
28750034 28750034 PRJNA474426_P_NODE_17707_length_241_cov_2.166667_g17502_i0 PRJNA474426 17707 241 2.166667 5.22166747 Methanoculleus sp. 7T 2937282 Archaea Archaea 66.2 3.61e-11   NR WP_248535981.1 2937282 g17502 i0 47.6 1.0207468879668 82 38 95.9 1 241 11 43 124 WP_248535981.1 hypothetical protein [Methanoculleus sp. 7T] diamond 246 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp. 7T
28781400 28781400 PRJNA474426_P_NODE_6027_length_440_cov_4.774936_g5824_i0 PRJNA474426 6027 440 4.774936 21.0097184 Saccharolobus sp. 2100761 Archaea Archaea 48.9 5.91e-4   NR MEM4884130.1 2100761 g5824 i0 36.2 0.790909090909091 58 37 39.5 0 98 271 90 147 MEM4884130.1 helix-turn-helix domain-containing protein [Saccharolobus sp.] diamond 348 48.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus sp.
28907622 28907622 PRJNA474426_P_NODE_12388_length_300_cov_1.569721_g12183_i0 PRJNA474426 12388 300 1.569721 4.709163 Methanogenium sp. 2196 Archaea Archaea 136 5.88e-39   NR MFA5395027.1 2196 g12183 i0 68.2 0.85 85 27 85 0 293 39 55 139 MFA5395027.1 hypothetical protein [Methanogenium sp.] diamond 255 136 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
28971082 28971082 PRJNA474426_P_NODE_26088_length_190_cov_1.929078_g25883_i0 PRJNA474426 26088 190 1.929078 3.6652482 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 49.7 2.13e-5   NR MCK5617053.1 2026773 g25883 i0 59.5 1.40526315789474 37 15 58.4 0 145 35 94 130 MCK5617053.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 267 49.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29318265 29318265 PRJNA474426_P_NODE_11609_length_312_cov_1.517110_g11404_i0 PRJNA474426 11609 312 1.51711 4.7333832 uncultured archaeon 115547 Archaea Archaea 187 3.329999999999999e-55   NR VVB78607.1 115547 g11404 i0 84.3 1.97115384615385 102 16 98.1 0 309 4 185 286 VVB78607.1 Uncharacterised protein [uncultured archaeon] diamond 615 187 1 Archaea               uncultured archaeon
29318268 29318268 PRJNA474426_P_NODE_24149_length_199_cov_2.720000_g23944_i0 PRJNA474426 24149 199 2.72 5.4128 Nanobdellota archaeon 2026764 Archaea Archaea 89.4 1.04e-21   NR MEK6928838.1 2026764 g23944 i0 66.7 0.904522613065327 60 20 90.5 0 7 186 1 60 MEK6928838.1 50S ribosomal protein L24 [Nanoarchaeota archaeon] diamond 180 89.4 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29381502 29381502 PRJNA474426_P_NODE_24629_length_197_cov_1.283784_g24424_i0 PRJNA474426 24629 197 1.283784 2.52905448 Nitrososphaerales archaeon 2268197 Archaea Archaea 60.1 1.32e-8   NR MFI5404907.1 2268197 g24424 i0 51.9 0.822335025380711 54 21 82.2 1 177 16 161 209 MFI5404907.1 hypothetical protein [Nitrososphaerales archaeon] diamond 162 60.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
29602183 29602183 PRJNA474426_P_NODE_30430_length_173_cov_2.395161_g30225_i0 PRJNA474426 30430 173 2.395161 4.14362853 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 73.2 2.69e-13   NR MCW8966856.1 2026773 g30225 i0 58.5 3.86705202312139 53 22 91.9 0 14 172 1013 1065 MCW8966856.1 RHS domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 669 73.2 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29855198 29855198 PRJNA474426_P_NODE_5931_length_444_cov_4.362025_g5728_i0 PRJNA474426 5931 444 4.362025 19.367391 Methanobrevibacter sp. 66852 Archaea Archaea 66.2 9.74e-11   NR MBO7735300.1 66852 g5728 i0 51.7 0.391891891891892 58 27 38.5 1 12 182 64 121 MBO7735300.1 hypothetical protein [Methanobrevibacter sp.] diamond 174 66.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30424227 30424227 PRJNA474426_P_NODE_8313_length_375_cov_1.469325_g8108_i0 PRJNA474426 8313 375 1.469325 5.50996875 Methanosarcina sp. 2213 Archaea Archaea 60.1 5.59e-9   NR HET8689601.1 2213 g8108 i0 40.2 0.696 87 46 64.8 2 362 120 6 92 HET8689601.1 hypothetical protein [Methanosarcina sp.] diamond 261 60.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30518583 30518583 PRJNA474426_P_NODE_14733_length_270_cov_4.190045_g14528_i0 PRJNA474426 14733 270 4.190045 11.3131215 Methanosarcinales archaeon 2250255 Archaea Archaea 52.4 1.97e-5   NR HUV84265.1 2250255 g14528 i0 39.7 0.755555555555556 68 39 75.6 1 50 253 145 210 HUV84265.1 hypothetical protein [Methanosarcinales archaeon] diamond 204 52.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30676425 30676425 PRJNA474426_P_NODE_23213_length_204_cov_2.980645_g23008_i0 PRJNA474426 23213 204 2.980645 6.0805158 Methanopyrus sp. SNP6 1937005 Archaea Archaea 42 0.0411   NR WP_148689199.1 1937005 g23008 i0 45.2 0.617647058823529 42 23 61.8 0 26 151 380 421 WP_148689199.1 acetate--CoA ligase family protein [Methanopyrus sp. SNP6] diamond 126 42 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri Methanopyrales Methanopyraceae Methanopyrus Methanopyrus sp. SNP6
31213287 31213287 PRJNA474426_P_NODE_9635_length_347_cov_1.258389_g9430_i0 PRJNA474426 9635 347 1.258389 4.36660983 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 55.1 4.68e-6   NR BCS91025.1 2250274 g9430 i0 38.5 0.674351585014409 78 45 65.7 2 245 18 1 77 BCS91025.1 MAG: DNA-(apurinic or apyrimidinic site) lyase [Candidatus Micrarchaeota archaeon] diamond 234 55.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31466894 31466894 PRJNA474426_P_NODE_28236_length_182_cov_1.157895_g28031_i0 PRJNA474426 28236 182 1.157895 2.1073689 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 53.5 2.55e-6   NR HRT03723.1 2026736 g28031 i0 49.1 0.93956043956044 57 27 92.3 2 170 3 150 205 HRT03723.1 hypothetical protein [Candidatus Iainarchaeum archaeon] diamond 171 53.5 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
31656315 31656315 PRJNA474426_P_NODE_15137_length_266_cov_1.290323_g14932_i0 PRJNA474426 15137 266 1.290323 3.43225918 Methanosarcina sp. 2213 Archaea Archaea 103 8.779999999999999e-25   NR HET8689803.1 2213 g14932 i0 59 0.93609022556391 83 34 93.6 0 1 249 112 194 HET8689803.1 tRNA(His) guanylyltransferase Thg1 family protein [Methanosarcina sp.] diamond 249 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31751282 31751282 PRJNA474426_P_NODE_33717_length_166_cov_0.871795_g33512_i0 PRJNA474426 33717 166 0.871795 1.4471797 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 87.8 1.68e-18   NR MAH46253.1 2026773 g33512 i0 70.4 3.90361445783133 54 16 97.6 0 163 2 167 220 MAH46253.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 648 87.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31782853 31782853 PRJNA474426_P_NODE_25457_length_193_cov_1.430556_g25252_i0 PRJNA474426 25457 193 1.430556 2.76097308 Ignisphaera sp. 2268142 Archaea Archaea 108 1.72e-25   NR MCI4437903.1 2268142 g25252 i0 95.8 0.746113989637306 48 2 74.6 0 22 165 296 343 MCI4437903.1 hypothetical protein [Ignisphaera sp.] diamond 144 108 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.
31972835 31972835 PRJNA474426_P_NODE_16818_length_249_cov_1.695000_g16613_i0 PRJNA474426 16818 249 1.695 4.22055 archaeon 1906665 Archaea Archaea 72 4.73e-13   NR NCQ52300.1 1906665 g16613 i0 70.2 0.566265060240964 47 14 56.6 0 247 107 174 220 NCQ52300.1 YcbK family protein [archaeon] diamond 141 72 1 Archaea               archaeon
31972836 31972836 PRJNA474426_P_NODE_18618_length_233_cov_2.467391_g18413_i0 PRJNA474426 18618 233 2.467391 5.74902103 Methanosarcina sp. 2213 Archaea Archaea 114 4.9199999999999993e-29   NR HET8687130.1 2213 g18413 i0 69.4 1.85407725321888 72 22 92.7 0 231 16 196 267 HET8687130.1 hypothetical protein [Methanosarcina sp.] diamond 432 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32099371 32099371 PRJNA474426_P_NODE_28478_length_181_cov_1.166667_g28273_i0 PRJNA474426 28478 181 1.166667 2.11166727 Candidatus Parvarchaeota archaeon 2077140 Archaea Archaea 75.5 4.49e-14   NR MBM3229106.1 2077140 g28273 i0 56.1 0.94475138121547 57 25 94.5 0 173 3 422 478 MBM3229106.1 hypothetical protein [Candidatus Parvarchaeota archaeon] diamond 171 75.5 1 Archaea   Nanobdellati Candidatus Parvarchaeota         Candidatus Parvarchaeota archaeon
32574273 32574273 PRJNA474426_P_NODE_13679_length_283_cov_1.594017_g13474_i0 PRJNA474426 13679 283 1.594017 4.51106811 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 3.63e-4   NR HET7345608.1 2169593 g13474 i0 40.7 0.57243816254417 54 29 57.2 1 34 195 12 62 HET7345608.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 162 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32762889 32762889 PRJNA474426_P_NODE_33980_length_165_cov_1.422414_g33775_i0 PRJNA474426 33980 165 1.422414 2.3469831 archaeon 1906665 Archaea Archaea 55.5 1.33e-7   NR NCQ51546.1 1906665 g33775 i0 63.8 0.854545454545454 47 14 80 1 3 134 79 125 NCQ51546.1 GNAT family N-acetyltransferase [archaeon] diamond 141 55.5 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;