RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA474426", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA474426 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27613503 27613503 PRJNA474426_P_NODE_2224_length_662_cov_4.024470_g2073_i0 PRJNA474426 2224 662 4.02447 26.6419914 Nitrosarchaeum sp. 2026886 Archaea Archaea 74.3 1.11e-13   NR MBP0119603.1 2026886 g2073 i0 63.1 0.294561933534743 65 22 29.5 1 494 300 1 63 MBP0119603.1 hypothetical protein [Nitrosarchaeum sp.] diamond 195 74.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
29381502 29381502 PRJNA474426_P_NODE_24629_length_197_cov_1.283784_g24424_i0 PRJNA474426 24629 197 1.283784 2.52905448 Nitrososphaerales archaeon 2268197 Archaea Archaea 60.1 1.32e-8   NR MFI5404907.1 2268197 g24424 i0 51.9 0.822335025380711 54 21 82.2 1 177 16 161 209 MFI5404907.1 hypothetical protein [Nitrososphaerales archaeon] diamond 162 60.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
32574273 32574273 PRJNA474426_P_NODE_13679_length_283_cov_1.594017_g13474_i0 PRJNA474426 13679 283 1.594017 4.51106811 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 3.63e-4   NR HET7345608.1 2169593 g13474 i0 40.7 0.57243816254417 54 29 57.2 1 34 195 12 62 HET7345608.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 162 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;