RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA474426" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA474426 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27170881 27170881 PRJNA474426_P_NODE_18382_length_235_cov_2.844086_g18177_i0 PRJNA474426 18382 235 2.844086 6.6836021 Minisyncoccota bacterium 2053589 Bacteria Bacteria 124 1.2e-33   NR MBP6888716.1 2053589 g18177 i0 76.7 0.931914893617021 73 17 93.2 0 224 6 111 183 MBP6888716.1 C39 family peptidase [Candidatus Paceibacterota bacterium] diamond 219 124 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28086853 28086853 PRJNA474426_P_NODE_31345_length_170_cov_1.553719_g31140_i0 PRJNA474426 31345 170 1.553719 2.6413223 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 2.43e-7   NR HVV15503.1 2053589 g31140 i0 64.8 0.952941176470588 54 19 95.3 0 4 165 2650 2703 HVV15503.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 162 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29696849 29696849 PRJNA474426_P_NODE_5910_length_445_cov_3.262626_g5708_i0 PRJNA474426 5910 445 3.262626 14.5186857 Minisyncoccota bacterium 2053589 Bacteria Bacteria 84 1.04e-15   NR MCL9972098.1 2053589 g5708 i0 83.7 0.330337078651685 49 8 33 0 148 2 71 119 MCL9972098.1 sigma-70 family RNA polymerase sigma factor [Candidatus Paceibacterota bacterium] diamond 147 84 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30929345 30929345 PRJNA474426_P_NODE_14734_length_270_cov_4.072398_g14529_i0 PRJNA474426 14734 270 4.072398 10.9954746 Minisyncoccota bacterium 2053589 Bacteria Bacteria 162 2.86e-45   NR MFA6608386.1 2053589 g14529 i0 96.4 5.6 84 3 93.3 0 18 269 86 169 MFA6608386.1 translation initiation factor IF-2 [Candidatus Paceibacterota bacterium] diamond 1512 162 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31087325 31087325 PRJNA474426_P_NODE_4355_length_509_cov_7.789130_g4163_i0 PRJNA474426 4355 509 7.78913 39.6466717 Minisyncoccota bacterium 2053589 Bacteria Bacteria 256 9.48e-83   NR HQV65056.1 2053589 g4163 i0 90.3 0.848722986247544 144 14 84.9 0 433 2 2 145 HQV65056.1 J domain-containing protein [Candidatus Paceibacterota bacterium] diamond 432 256 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31909591 31909591 PRJNA474426_P_NODE_16897_length_248_cov_2.447236_g16692_i0 PRJNA474426 16897 248 2.447236 6.06914528 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.7 2.23e-6   NR MBP6888605.1 2053589 g16692 i0 61.1 0.435483870967742 36 14 43.5 0 110 3 256 291 MBP6888605.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 108 54.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31941045 31941045 PRJNA474426_P_NODE_8577_length_369_cov_1.603125_g8372_i0 PRJNA474426 8577 369 1.603125 5.91553125 Minisyncoccota bacterium 2053589 Bacteria Bacteria 115 2.4e-29   NR MEO6536177.1 2053589 g8372 i0 74.6 0.577235772357724 71 18 57.7 0 369 157 155 225 MEO6536177.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 213 115 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32162845 32162845 PRJNA474426_P_NODE_20258_length_222_cov_1.387283_g20053_i0 PRJNA474426 20258 222 1.387283 3.07976826 Minisyncoccota bacterium 2053589 Bacteria Bacteria 91.7 4.5e-20   NR MEZ0209105.1 2053589 g20053 i0 68.1 0.972972972972973 72 14 91.9 2 19 222 209 275 MEZ0209105.1 DNA-directed RNA polymerase subunit alpha [Candidatus Paceibacterota bacterium] diamond 216 91.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32384163 32384163 PRJNA474426_P_NODE_6119_length_437_cov_2.644330_g5916_i0 PRJNA474426 6119 437 2.64433 11.5557221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 63.5 2.93e-9   NR MEZ0209129.1 2053589 g5916 i0 87.1 0.212814645308924 31 4 21.3 0 262 354 3 33 MEZ0209129.1 peroxiredoxin [Candidatus Paceibacterota bacterium] diamond 93 63.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32794153 32794153 PRJNA474426_P_NODE_35440_length_163_cov_1.605263_g35235_i0 PRJNA474426 35440 163 1.605263 2.61657869 Minisyncoccota bacterium 2053589 Bacteria Bacteria 96.7 1.65e-24   NR MFA5432895.1 2053589 g35235 i0 88 0.920245398773006 50 6 92 0 158 9 44 93 MFA5432895.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 150 96.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;