RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA474426" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA474426 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27392472 27392472 PRJNA474426_P_NODE_13183_length_289_cov_1.900000_g12978_i0 PRJNA474426 13183 289 1.9 5.491 Anaerolineae bacterium 2052143 Bacteria Bacteria 55.1 2.65e-6   NR MFN8373876.1 2052143 g12978 i0 71.9 0.332179930795848 32 9 33.2 0 289 194 288 319 MFN8373876.1 NAD(P)H-quinone oxidoreductase [Anaerolineae bacterium] diamond 96 55.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28513531 28513531 PRJNA474426_P_NODE_16807_length_249_cov_2.060000_g16602_i0 PRJNA474426 16807 249 2.06 5.1294 Kouleothrix 186475 Bacteria Bacteria 87 9.51e-18   NR HEX2910407.1 2448782 g16602 i0 48.6 2.67469879518072 74 37 88 1 10 228 234 307 HEX2910407.1 hypothetical protein [Chloroflexia bacterium] diamond 666 87 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
30392661 30392661 PRJNA474426_P_NODE_8273_length_375_cov_6.024540_g8068_i0 PRJNA474426 8273 375 6.02454 22.592025 Anaerolineales bacterium 2073117 Bacteria Bacteria 122 2.75e-29   NR HLE92716.1 2073117 g8068 i0 53.4 0.928 116 54 92.8 0 361 14 172 287 HLE92716.1 phage portal protein [Anaerolineales bacterium] diamond 348 122 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31103294 31103294 PRJNA474426_P_NODE_20135_length_223_cov_1.022989_g19930_i0 PRJNA474426 20135 223 1.022989 2.28126547 FCB group 1783270 Bacteria Bacteria 85.5 2.59e-17   NR MAT41911.1 2024896 g19930 i0 67.1 3.59192825112108 70 21 94.2 2 14 223 480 547 MAT41911.1 hypothetical protein [Anaerolineaceae bacterium] diamond 801 85.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31213283 31213283 PRJNA474426_P_NODE_13915_length_280_cov_1.800866_g13710_i0 PRJNA474426 13915 280 1.800866 5.0424248 Anaerolineales bacterium 2073117 Bacteria Bacteria 99.8 6.18e-23   NR MCK6584251.1 2073117 g13710 i0 93.5 3.05357142857143 46 3 49.3 0 268 131 253 298 MCK6584251.1 phosphotransferase family protein [Anaerolineales bacterium] diamond 855 99.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31593459 31593459 PRJNA474426_P_NODE_12376_length_300_cov_1.844622_g12171_i0 PRJNA474426 12376 300 1.844622 5.533866 Chloroflexota bacterium 2026724 Bacteria Bacteria 176 3.9e-50   NR RPI93045.1 2026724 g12171 i0 85.7 0.98 98 14 98 0 299 6 63 160 RPI93045.1 MAG: hypothetical protein EHM40_11050 [Chloroflexota bacterium] diamond 294 176 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31624840 31624840 PRJNA474426_P_NODE_9756_length_344_cov_2.159322_g9551_i0 PRJNA474426 9756 344 2.159322 7.42806768 Chloroflexota bacterium 2026724 Bacteria Bacteria 46.2 0.00709   NR MBI2757063.1 2026724 g9551 i0 34.1 0.741279069767442 85 33 74.1 2 3 257 656 717 MBI2757063.1 hypothetical protein [Chloroflexota bacterium] diamond 255 46.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31688074 31688074 PRJNA474426_P_NODE_13397_length_286_cov_2.459916_g13192_i0 PRJNA474426 13397 286 2.459916 7.03535976 Chloroflexota bacterium 2026724 Bacteria Bacteria 130 1.22e-33   NR MBT9158925.1 2026724 g13192 i0 66.3 1.91958041958042 92 30 95.5 1 14 286 151 242 MBT9158925.1 hypothetical protein [Chloroflexota bacterium] diamond 549 130 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32321233 32321233 PRJNA474426_P_NODE_36139_length_162_cov_2.902655_g35934_i0 PRJNA474426 36139 162 2.902655 4.7023011 Anaerolineales bacterium 2073117 Bacteria Bacteria 57 1.13e-7   NR MCZ2127444.1 2073117 g35934 i0 54 0.925925925925926 50 22 92.6 1 12 161 55 103 MCZ2127444.1 hypothetical protein [Anaerolineales bacterium] diamond 150 57 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32384159 32384159 PRJNA474426_P_NODE_23619_length_202_cov_1.542484_g23414_i0 PRJNA474426 23619 202 1.542484 3.11581768 Anaerolineales bacterium 2073117 Bacteria Bacteria 49.7 6.7e-5   NR HEY2979921.1 2073117 g23414 i0 58.1 0.638613861386139 43 14 63.9 1 9 137 230 268 HEY2979921.1 PD-(D/E)XK nuclease family protein [Anaerolineales bacterium] diamond 129 49.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32479307 32479307 PRJNA474426_P_NODE_26119_length_190_cov_1.631206_g25914_i0 PRJNA474426 26119 190 1.631206 3.0992914 Anaerolineae bacterium 2052143 Bacteria Bacteria 65.9 1.24e-10   NR HEX9075367.1 2052143 g25914 i0 48.3 1.84736842105263 58 30 91.6 0 6 179 354 411 HEX9075367.1 LCP family protein [Anaerolineae bacterium] diamond 351 65.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32794147 32794147 PRJNA474426_P_NODE_14460_length_273_cov_2.593750_g14255_i0 PRJNA474426 14460 273 2.59375 7.0809375 Caldilineaceae bacterium 2614250 Bacteria Bacteria 56.2 3.72e-7   NR MCC6458038.1 2614250 g14255 i0 46.4 0.615384615384615 56 26 57.1 1 11 166 42 97 MCC6458038.1 hypothetical protein [Caldilineaceae bacterium] diamond 168 56.2 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;