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contig_metadata

16 rows where bioproject = "PRJNA474426", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 16 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 16 ✖

bioproject 1

  • PRJNA474426 · 16 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17024772 17024772 PRJNA474426_P_NODE_26814_length_187_cov_1.869565_g26609_i0 PRJNA474426 26814 187 1.869565 3.49608655 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 106 5.17e-26   NR MBP9733066.1 2035772 g26609 i0 96.2 0.834224598930481 52 2 83.4 0 3 158 247 298 MBP9733066.1 site-specific tyrosine recombinase XerD [Candidatus Omnitrophota bacterium] diamond 156 106 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
23399798 23399798 PRJNA474426_P_NODE_5659_length_454_cov_3.051852_g5458_i0 PRJNA474426 5659 454 3.051852 13.85540808 Candidatus Omnitrophica bacterium CG1_ 2035772 Bacteria Bacteria 247 2.96e-79   NR OIO36212.1 1805288 g5458 i0 87.8 2.75550660792952 139 17 91.9 0 452 36 155 293 OIO36212.1 MAG: ketol-acid reductoisomerase [Candidatus Omnitrophica bacterium CG1_02_46_14] diamond 1251 247 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_46_14
26727652 26727652 PRJNA474426_P_NODE_35181_length_164_cov_0.886957_g34976_i0 PRJNA474426 35181 164 0.886957 1.45460948 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.4 1.47e-9   NR MEI8344939.1 2035772 g34976 i0 55.3 0.859756097560976 47 21 86 0 3 143 280 326 MEI8344939.1 glycosyltransferase family 39 protein [Candidatus Omnitrophota bacterium] diamond 141 62.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28402716 28402716 PRJNA474426_P_NODE_25526_length_193_cov_1.055556_g25321_i0 PRJNA474426 25526 193 1.055556 2.03722308 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 46.6 8.65e-4   NR MDD5551265.1 2035772 g25321 i0 44.2 0.66839378238342 43 24 66.8 0 8 136 710 752 MDD5551265.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 129 46.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28529191 28529191 PRJNA474426_P_NODE_22347_length_209_cov_1.925000_g22142_i0 PRJNA474426 22347 209 1.925 4.02325 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.4 0.0056   NR MCK4882216.1 2035772 g22142 i0 55.9 0.990430622009569 34 15 48.8 0 106 207 15 48 MCK4882216.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 207 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28529194 28529194 PRJNA474426_P_NODE_28707_length_180_cov_1.274809_g28502_i0 PRJNA474426 28707 180 1.274809 2.2946562 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42 0.0171   NR MFH0762863.1 2035772 g28502 i0 80 1.3 20 4 33.3 0 121 180 117 136 MFH0762863.1 NADH-quinone oxidoreductase subunit C [Candidatus Omnitrophota bacterium] diamond 234 42 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28623914 28623914 PRJNA474426_P_NODE_25067_length_195_cov_1.054795_g24862_i0 PRJNA474426 25067 195 1.054795 2.05685025 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 129 1e-34   NR MDP3791639.1 2035772 g24862 i0 93.8 9.84615384615385 64 4 98.5 0 1 192 132 195 MDP3791639.1 SDR family oxidoreductase [Candidatus Omnitrophota bacterium] diamond 1920 129 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28812832 28812832 PRJNA474426_P_NODE_33568_length_166_cov_0.880342_g33363_i0 PRJNA474426 33568 166 0.880342 1.46136772 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62 4.74e-10   NR MBI3083424.1 2035772 g33363 i0 59.1 1.66265060240964 44 18 79.5 0 164 33 55 98 MBI3083424.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 276 62 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29318270 29318270 PRJNA474426_P_NODE_6949_length_410_cov_4.786704_g6745_i0 PRJNA474426 6949 410 4.786704 19.6254864 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 57.4 1.88e-6   NR MCK9571817.1 2035772 g6745 i0 46.1 0.55609756097561 76 38 53.4 2 30 248 987 1062 MCK9571817.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 228 57.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30107760 30107760 PRJNA474426_P_NODE_11672_length_311_cov_1.526718_g11467_i0 PRJNA474426 11672 311 1.526718 4.74809298 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 77.4 5.46e-15   NR MDE2027608.1 2035772 g11467 i0 53.4 1.09003215434084 58 27 55.9 0 1 174 141 198 MDE2027608.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 339 77.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30361089 30361089 PRJNA474426_P_NODE_15812_length_259_cov_1.457143_g15607_i0 PRJNA474426 15812 259 1.457143 3.77400037 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 3.63e-6   NR MDP3722826.1 2035772 g15607 i0 55.6 0.625482625482625 54 24 62.5 0 97 258 14 67 MDP3722826.1 type II secretion system protein [Candidatus Omnitrophota bacterium] diamond 162 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30392658 30392658 PRJNA474426_P_NODE_5093_length_476_cov_2.311475_g4898_i0 PRJNA474426 5093 476 2.311475 11.002621 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.5 2.29e-8   NR MBF0523047.1 2035772 g4898 i0 31.9 0.71218487394958 113 75 71.2 1 8 346 228 338 MBF0523047.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 339 63.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30424226 30424226 PRJNA474426_P_NODE_573_length_1039_cov_5.853535_g502_i0 PRJNA474426 573 1039 5.853535 60.81822865 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 233 3.0099999999999997e-69   NR MBI3321479.1 2035772 g502 i0 69.1 0.51395572666025 178 54 51.1 1 542 12 245 422 MBI3321479.1 3-deoxy-D-manno-octulosonic acid transferase [Candidatus Omnitrophota bacterium] diamond 534 233 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31751274 31751274 PRJNA474426_P_NODE_19717_length_225_cov_2.323864_g19512_i0 PRJNA474426 19717 225 2.323864 5.228694 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 142 4.649999999999999e-40   NR MDD5428011.1 2035772 g19512 i0 91.9 4.85333333333333 74 6 98.7 0 3 224 30 103 MDD5428011.1 indole-3-glycerol phosphate synthase TrpC [Candidatus Omnitrophota bacterium] diamond 1092 142 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31877777 31877777 PRJNA474426_P_NODE_34377_length_165_cov_0.879310_g34172_i0 PRJNA474426 34377 165 0.87931 1.4508615 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 96.3 3.37e-24   NR MBI5872974.1 2035772 g34172 i0 95.5 0.8 44 2 80 0 153 22 28 71 MBI5872974.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 132 96.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32511080 32511080 PRJNA474426_P_NODE_13539_length_285_cov_1.118644_g13334_i0 PRJNA474426 13539 285 1.118644 3.1881354 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 160 2.42e-47   NR HBO96755.1 2035772 g13334 i0 89.9 16.8631578947368 89 9 93.7 0 10 276 49 137 HBO96755.1 divalent metal cation transporter [Candidatus Omnitrophota bacterium] diamond 4806 160 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;