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contig_metadata

4 rows where bioproject = "PRJNA474426", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA474426 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28355564 28355564 PRJNA474426_P_NODE_11226_length_318_cov_1.862454_g11021_i0 PRJNA474426 11226 318 1.862454 5.92260372 root 1 Root_unresolved Root_unresolved 56.2 7.33e-7   NR MBK7380682.1 2049428 g11021 i0 45.6 1.27358490566038 79 41 74.5 1 314 78 46 122 MBK7380682.1 hypothetical protein [Ignavibacteriales bacterium] diamond 405 56.6 0.992932862190813 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
29475931 29475931 PRJNA474426_P_NODE_33310_length_166_cov_1.316239_g33105_i0 PRJNA474426 33310 166 1.316239 2.18495674 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 57.8 5.11e-8   NR MBV6514310.1 2651163 g33105 i0 62 0.903614457831325 50 19 90.4 0 12 161 172 221 MBV6514310.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 150 57.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
30266118 30266118 PRJNA474426_P_NODE_8352_length_373_cov_11.459877_g8147_i0 PRJNA474426 8352 373 11.459877 42.74534121 Ignavibacteria bacterium 2053306 Bacteria Bacteria 114 4.23e-27   NR MBT8377824.1 2053306 g8147 i0 59.4 7.72922252010724 96 38 77.2 1 14 301 348 442 MBT8377824.1 replicative DNA helicase [Ignavibacteria bacterium] diamond 2883 114 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30424219 30424219 PRJNA474426_P_NODE_16893_length_248_cov_2.864322_g16688_i0 PRJNA474426 16893 248 2.864322 7.10351856 Ignavibacteria bacterium 2053306 Bacteria Bacteria 105 2.8099999999999998e-24   NR MBM2817395.1 2053306 g16688 i0 67.6 3.27822580645161 68 22 82.3 0 41 244 436 503 MBM2817395.1 hypothetical protein [Ignavibacteria bacterium] diamond 813 105 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;