RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA474426", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA474426 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26854991 26854991 PRJNA474426_P_NODE_5681_length_453_cov_3.094059_g5480_i0 PRJNA474426 5681 453 3.094059 14.01608727 Fibrobacteria bacterium 2725311 Bacteria Bacteria 133 2.05e-33   NR HQF56314.1 2725311 g5480 i0 75.6 1.62913907284768 82 20 54.3 0 258 13 256 337 HQF56314.1 DUF1957 domain-containing protein [Fibrobacteria bacterium] diamond 738 133 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27945248 27945248 PRJNA474426_P_NODE_25465_length_193_cov_1.416667_g25260_i0 PRJNA474426 25465 193 1.416667 2.73416731 Pseudomonadati 3379134 Bacteria Bacteria 44.7 0.00267   NR WP_295071124.1 261512 g25260 i0 33.3 1.64766839378238 63 39 97.9 1 3 191 53 112 WP_295071124.1 SLATT domain-containing protein [uncultured Fibrobacter sp.] diamond 318 45.1 0.991130820399113 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter uncultured Fibrobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;