RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA474426", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA474426 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29065888 29065888 PRJNA474426_P_NODE_5128_length_475_cov_1.417840_g4933_i0 PRJNA474426 5128 475 1.41784 6.73474 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 251 8.72e-83   NR OGG55136.1 1798489 g4933 i0 81.2 0.941052631578947 149 28 94.1 0 17 463 9 157 OGG55136.1 MAG: hypothetical protein A3D62_00845 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_11] diamond 447 251 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_11
29129129 29129129 PRJNA474426_P_NODE_17249_length_245_cov_1.423469_g17044_i0 PRJNA474426 17249 245 1.423469 3.48749905 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 118 3.1499999999999996e-31   NR MBI5644876.1 2030810 g17044 i0 67.9 1.91020408163265 78 25 95.5 0 240 7 89 166 MBI5644876.1 class F sortase [Candidatus Kaiserbacteria bacterium] diamond 468 118 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;