RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA473824", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473824 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1096487 1096487 PRJNA473824_P_NODE_39401_length_193_cov_3.871795_g38763_i0 PRJNA473824 39401 193 3.871795 7.47256435 root 1 Root_unresolved Root_unresolved 357 3.1499999999999996e-94   NTclustered gi|2620236085|gb|OR777220.1| 10515 g38763 i0 100 99.9585492227979 193 0 100 0 1 193 15220 15028 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 19292 357 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
4924311 4924311 PRJNA473824_P_NODE_127864_length_160_cov_15.731707_g127226_i0 PRJNA473824 127864 160 15.731707 25.1707312 root 1 Root_unresolved Root_unresolved 289 9.29e-74   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g127226 i0 99.371 99.375 159 1 99 0 1 159 18298 18140 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15900 289 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
5549777 5549777 PRJNA473824_P_NODE_115745_length_172_cov_9.229630_g115107_i0 PRJNA473824 115745 172 9.22963 15.8749636 Mastadenovirus caesari 3241411 Viruses Viruses 313 5.989999999999998e-81   NTclustered gi|1706705536|gb|MK165453.1| 129951 g115107 i0 99.419 100 172 1 100 0 1 172 11332 11161 Human mastadenovirus C isolate SX-2004-327 blastn 17200 313 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12575454 12575454 PRJNA473824_P_NODE_35030_length_203_cov_3.759036_g34392_i0 PRJNA473824 35030 203 3.759036 7.63084308 Mastadenovirus 10509 Viruses Viruses 375 9.24e-100   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g34392 i0 100 100 203 0 100 0 1 203 18144 17942 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 20300 375 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;