RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473824", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA473824 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13199865 13199865 PRJNA473824_P_NODE_122151_length_168_cov_3.152672_g121513_i0 PRJNA473824 122151 168 3.152672 5.29648896 Orbicella faveolata 48498 Cnidaria other_Eukaryota 58.4 3.03e-4   NTclustered gi|1176111631|ref|XM_020771159.1| 48498 g121513 i0 97.059 0.202380952380952 34 1 20 0 2 35 1006 1039 PREDICTED: Orbicella faveolata protein SETSIP-like (LOC110064152), mRNA blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
31561769 31561769 PRJNA473824_P_NODE_166636_length_150_cov_4.017699_g165998_i0 PRJNA473824 166636 150 4.017699 6.0265485 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 46.6 4.48e-4   NR XP_057294751.1 13093 g165998 i0 68 5.68 25 8 50 0 148 74 282 306 XP_057294751.1 uncharacterized protein LOC130623300 [Hydractinia symbiolongicarpus] diamond 852 46.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;