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contig_metadata

28 rows where bioproject = "PRJNA473824" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 28 ✖

bioproject 1

  • PRJNA473824 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2997032 2997032 PRJNA473824_P_NODE_134263_length_153_cov_2.017241_g133625_i0 PRJNA473824 134263 153 2.017241 3.08637873 Jenufa minuta 993092 Plants Plants 259 6.88e-65   NTclustered gi|1829768154|ref|NC_046780.1| 993092 g133625 i0 97.386 1 153 3 100 1 1 153 21797 21646 Jenufa minuta culture CAUP:H8102 mitochondrion, complete genome blastn 153 259 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
2997707 2997707 PRJNA473824_P_NODE_44323_length_184_cov_1.857143_g43685_i0 PRJNA473824 44323 184 1.857143 3.41714312 Jenufa minuta 993092 Plants Plants 340 2.99e-89   NTclustered gi|959124355|ref|NC_028582.1| 993092 g43685 i0 100 100.603260869565 184 0 100 0 1 184 45826 46009 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 18511 340 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
4273596 4273596 PRJNA473824_P_NODE_171984_length_150_cov_1.380531_g171346_i0 PRJNA473824 171984 150 1.380531 2.0707965 Jenufa minuta 993092 Plants Plants 278 1.85e-70   NTclustered gi|1829768154|ref|NC_046780.1| 993092 g171346 i0 100 1 150 0 100 0 1 150 18910 19059 Jenufa minuta culture CAUP:H8102 mitochondrion, complete genome blastn 150 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
4273652 4273652 PRJNA473824_P_NODE_20184_length_263_cov_1.194690_g19546_i0 PRJNA473824 20184 263 1.19469 3.1420347 Auxenochlorella pyrenoidosa 3078 Plants Plants 481 2.58e-131   NTclustered gi|1201359271|gb|MF040793.1| 3078 g19546 i0 99.62 90.5703422053232 263 1 100 0 1 263 493 231 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 23820 481 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
6823972 6823972 PRJNA473824_P_NODE_130106_length_158_cov_0.966942_g129468_i0 PRJNA473824 130106 158 0.966942 1.52776836 Jenufa minuta 993092 Plants Plants 292 7.07e-75   NTclustered gi|959124355|ref|NC_028582.1| 993092 g129468 i0 100 98.3670886075949 158 0 100 0 1 158 43743 43900 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 15542 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
8099935 8099935 PRJNA473824_P_NODE_32047_length_211_cov_3.683908_g31409_i0 PRJNA473824 32047 211 3.683908 7.77304588 Jenufa minuta 993092 Plants Plants 383 5.79e-102   NTclustered gi|959124355|ref|NC_028582.1| 993092 g31409 i0 99.526 51.654028436019 211 0 100 1 1 211 92522 92313 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 10899 383 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
10650067 10650067 PRJNA473824_P_NODE_13449_length_330_cov_1.464164_g12812_i0 PRJNA473824 13449 330 1.464164 4.8317412 Jenufa minuta 993092 Plants Plants 610 4.09e-170   NTclustered gi|959124355|ref|NC_028582.1| 993092 g12812 i0 100 99.4848484848485 330 0 100 0 1 330 46427 46098 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 32830 610 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
14475816 14475816 PRJNA473824_P_NODE_8012_length_480_cov_3.146727_g7426_i0 PRJNA473824 8012 480 3.146727 15.1042896 Jenufa minuta 993092 Plants Plants 854 0   NTclustered gi|1829768154|ref|NC_046780.1| 993092 g7426 i0 98.952 0.99375 477 5 99 0 4 480 17505 17981 Jenufa minuta culture CAUP:H8102 mitochondrion, complete genome blastn 477 854 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
15749793 15749793 PRJNA473824_P_NODE_6013_length_638_cov_2.618968_g5481_i0 PRJNA473824 6013 638 2.618968 16.70901584 Jenufa minuta 993092 Plants Plants 933 0   NTclustered gi|959124355|ref|NC_028582.1| 993092 g5481 i0 98.857 221.633228840125 525 2 83 1 1 521 102925 103449 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 141402 933 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
17024290 17024290 PRJNA473824_P_NODE_43214_length_186_cov_2.355705_g42576_i0 PRJNA473824 43214 186 2.355705 4.3816113 Jenufa minuta 993092 Plants Plants 344 2.34e-90   NTclustered gi|959124355|ref|NC_028582.1| 993092 g42576 i0 100 102.134408602151 186 0 100 0 1 186 31355 31540 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 18997 344 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
18298654 18298654 PRJNA473824_P_NODE_55355_length_173_cov_5.698529_g54717_i0 PRJNA473824 55355 173 5.698529 9.85845517 Trebouxia 13786 Plants Plants 80.5 7e-16   NR KAL0035877.1 2905653 g54717 i0 71 7.49132947976879 62 12 97.1 1 169 2 284 345 KAL0035877.1 hypothetical protein WJX77_006076 [Trebouxia sp. C0004] diamond 1296 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
19573064 19573064 PRJNA473824_P_NODE_7996_length_481_cov_2.905405_g7410_i0 PRJNA473824 7996 481 2.905405 13.97499805 Jenufa minuta 993092 Plants Plants 883 0   NTclustered gi|959124355|ref|NC_028582.1| 993092 g7410 i0 99.792 148.357588357588 481 1 100 0 1 481 104205 103725 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 71360 883 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
20847869 20847869 PRJNA473824_P_NODE_124737_length_165_cov_1.218750_g124099_i0 PRJNA473824 124737 165 1.21875 2.0109375 Jenufa minuta 993092 Plants Plants 305 9.59e-79   NTclustered gi|959124355|ref|NC_028582.1| 993092 g124099 i0 100 99.0424242424242 165 0 100 0 1 165 34387 34223 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 16342 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
20847946 20847946 PRJNA473824_P_NODE_131757_length_156_cov_0.983193_g131119_i0 PRJNA473824 131757 156 0.983193 1.53378108 Jenufa minuta 993092 Plants Plants 124 2.6799999999999998e-24   NTclustered gi|959124355|ref|NC_028582.1| 993092 g131119 i0 98.571 0.448717948717949 70 1 45 0 87 156 93153 93084 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 70 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
20848243 20848243 PRJNA473824_P_NODE_19597_length_267_cov_1.547826_g18959_i0 PRJNA473824 19597 267 1.547826 4.13269542 Jenufa minuta 993092 Plants Plants 442 1.2399999999999995e-119   NTclustered gi|959124355|ref|NC_028582.1| 993092 g18959 i0 97.318 64.314606741573 261 6 97 1 8 267 104637 104897 Jenufa minuta culture-collection CAUP:H 8102 chloroplast, complete genome blastn 17172 442 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa minuta
21498402 21498402 PRJNA473824_P_NODE_4657_length_889_cov_2.490610_g4208_i0 PRJNA473824 4657 889 2.49061 22.1415229 Chlorophyta 3041 Plants Plants 998 0   NTclustered gi|2131194042|gb|MZ561475.1| 83794 g4208 i0 86.952 113.418447694038 889 114 99 2 2 889 59871 58984 Ulva californica strain U484-3 chloroplast, complete genome blastn 100829 998 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva californica
24673437 24673437 PRJNA473824_P_NODE_8820_length_441_cov_2.806931_g8215_i0 PRJNA473824 8820 441 2.806931 12.37856571 Chloroidium sp. KL-2023a 3031248 Plants Plants 782 0   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g8215 i0 98.639 145.08843537415 441 6 100 0 1 441 220776 220336 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 63984 782 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
26902709 26902709 PRJNA473824_P_NODE_54501_length_173_cov_5.948529_g53863_i0 PRJNA473824 54501 173 5.948529 10.29095517 Chlorellaceae 35461 Plants Plants 50.4 2.74e-5   NR KAL4527278.1 1650286 g53863 i0 91.7 1.2485549132948 24 2 41.6 0 100 171 244 267 KAL4527278.1 hypothetical protein Ndes2437A_g02451 [Chlorella desiccata (nom. nud.)] diamond 216 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27044628 27044628 PRJNA473824_P_NODE_153582_length_151_cov_3.377193_g152944_i0 PRJNA473824 153582 151 3.377193 5.09956143 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 43.1 0.00782   NR KAG7666926.1 1650286 g152944 i0 63 1.0728476821192101 27 10 53.6 0 70 150 231 257 KAG7666926.1 hypothetical protein KSW81_000678 [Chlorella desiccata (nom. nud.)] diamond 162 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27123660 27123660 PRJNA473824_P_NODE_113462_length_173_cov_2.389706_g112824_i0 PRJNA473824 113462 173 2.389706 4.13419138 root 1 Root_unresolved Root_unresolved 43.5 0.00782   NR KAK9819377.1 381761 g112824 i0 91.3 1.94219653179191 23 2 39.9 0 169 101 452 474 KAK9819377.1 hypothetical protein WJX81_001266 [Elliptochloris bilobata] diamond 336 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Elliptochloris Elliptochloris bilobata
27850306 27850306 PRJNA473824_P_NODE_126524_length_162_cov_4.496000_g125886_i0 PRJNA473824 126524 162 4.496 7.28352 Trebouxiophyceae 75966 Plants Plants 78.6 2.86e-15   NR YP_009105386.1 33092 g125886 i0 66 2.94444444444444 53 18 98.1 0 161 3 1204 1256 YP_009105386.1 cell division protein [Koliella longiseta] diamond 477 79.3 0.991172761664565 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
28166281 28166281 PRJNA473824_P_NODE_117705_length_172_cov_3.474074_g117067_i0 PRJNA473824 117705 172 3.474074 5.97540728 Chlorophyta 3041 Plants Plants 45.1 0.00225   NR KAK9809702.1 706552 g117067 i0 87.5 0.802325581395349 24 3 41.9 0 101 172 1426 1449 KAK9809702.1 hypothetical protein WJX73_007079 [Symbiochloris irregularis] diamond 138 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
28339527 28339527 PRJNA473824_P_NODE_132626_length_155_cov_0.991525_g131988_i0 PRJNA473824 132626 155 0.991525 1.53686375 Monoraphidium neglectum 145388 Plants Plants 40.4 0.0446   NR XP_013897247.1 145388 g131988 i0 40 0.774193548387097 40 24 77.4 0 147 28 52 91 XP_013897247.1 Protein SYM1 [Monoraphidium neglectum] diamond 120 40.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
28592228 28592228 PRJNA473824_P_NODE_80087_length_173_cov_3.382353_g79449_i0 PRJNA473824 80087 173 3.382353 5.85147069 [Myrmecia] bisecta 41462 Plants Plants 79.7 1.27e-15   NR KAK9819898.1 41462 g79449 i0 75 0.832369942196532 48 7 83.2 1 161 18 167 209 KAK9819898.1 hypothetical protein WJX72_003766 [[Myrmecia] bisecta] diamond 144 79.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
29081950 29081950 PRJNA473824_P_NODE_159668_length_151_cov_2.929825_g159030_i0 PRJNA473824 159668 151 2.929825 4.42403575 Chlorophyta 3041 Plants Plants 42 0.0197   NR CAD7701162.1 121088 g159030 i0 55.9 3.05960264900662 34 15 67.5 0 28 129 92 125 CAD7701162.1 unnamed protein product [Ostreobium quekettii] diamond 462 42.4 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
29633678 29633678 PRJNA473824_P_NODE_69270_length_173_cov_3.977941_g68632_i0 PRJNA473824 69270 173 3.977941 6.88183793 Bryopsis sp. KO-2 3115439 Plants Plants 49.3 6.43e-5   NR GMH32261.1 3041901 g68632 i0 59.5 0.641618497109827 37 13 60.7 1 129 25 196 232 GMH32261.1 hypothetical protein BSKO_00095 [Bryopsis sp. KO-2023] diamond 111 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
30534658 30534658 PRJNA473824_P_NODE_154593_length_151_cov_3.315789_g153955_i0 PRJNA473824 154593 151 3.315789 5.00684139 Chlorophyta 3041 Plants Plants 50.4 2.03e-5   NR CAD7699737.1 121088 g153955 i0 60 2.24503311258278 35 10 61.6 1 147 55 132 166 CAD7699737.1 unnamed protein product [Ostreobium quekettii] diamond 339 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
31403619 31403619 PRJNA473824_P_NODE_53476_length_173_cov_6.345588_g52838_i0 PRJNA473824 53476 173 6.345588 10.97786724 Trebouxia sp. C 2796353 Plants Plants 45.1 0.00223   NR KAL3133770.1 3373145 g52838 i0 85.7 0.815028901734104 21 3 36.4 0 3 65 141 161 KAL3133770.1 hypothetical protein ABBQ32_008252 [Trebouxia sp. C0010 RCD-2024] diamond 141 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;