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contig_metadata

32 rows where bioproject = "PRJNA473824", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 32 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 32 ✖

bioproject 1

  • PRJNA473824 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5550045 5550045 PRJNA473824_P_NODE_146425_length_151_cov_4.175439_g145787_i0 PRJNA473824 146425 151 4.175439 6.30491289 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 67.6 4.4e-7   NTclustered gi|2912653302|gb|CP180537.1| 3398393 g145787 i0 100 0.47682119205298 36 0 24 0 41 76 4517732 4517767 Oleiharenicola sp. Vm1 chromosome, complete genome blastn 72 67.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1
8100124 8100124 PRJNA473824_P_NODE_46647_length_180_cov_2.944056_g46009_i0 PRJNA473824 46647 180 2.944056 5.2993008 Congregicoccus parvus 3081749 Bacteria Bacteria 80.5 7e-11   NTclustered gi|2599616993|dbj|AP028972.1| 3081749 g46009 i0 90.164 0.338888888888889 61 6 34 0 1 61 290932 290872 Opitutales bacterium ASA1 DNA, complete genome blastn 61 80.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Alterococcaceae Congregicoccus Congregicoccus parvus
11299893 11299893 PRJNA473824_P_NODE_7249_length_525_cov_1.946721_g6674_i0 PRJNA473824 7249 525 1.946721 10.22028525 Verrucomicrobiota 74201 Bacteria Bacteria 525 2.5199999999999995e-144   NTclustered gi|183579829|emb|AM905426.1| 320771 g6674 i0 84.82 90.3352380952381 527 75 100 5 1 525 737 214 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 47426 525 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
13200762 13200762 PRJNA473824_P_NODE_55271_length_173_cov_5.720588_g54633_i0 PRJNA473824 55271 173 5.720588 9.89661724 Roseimicrobium sp. ORNL1 2711231 Bacteria Bacteria 89.8 1.11e-13   NTclustered gi|1815841271|gb|CP049143.1| 2711231 g54633 i0 88 0.433526011560694 75 9 43 0 2 76 1908904 1908978 Roseimicrobium sp. ORNL1 chromosome, complete genome blastn 75 89.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseimicrobium Roseimicrobium sp. ORNL1
14475447 14475447 PRJNA473824_P_NODE_36912_length_199_cov_0.882716_g36274_i0 PRJNA473824 36912 199 0.882716 1.75660484 Luteolibacter sp. 1962973 Bacteria Bacteria 224 3.4599999999999996e-54   NTclustered gi|2836248208|gb|CP121322.1| 1962973 g36274 i0 86.935 67.0552763819096 199 26 100 0 1 199 1009915 1010113 MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome blastn 13344 224 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
17023508 17023508 PRJNA473824_P_NODE_117374_length_172_cov_3.851852_g116736_i0 PRJNA473824 117374 172 3.851852 6.62518544 Bacteria 2 Bacteria Bacteria 89.7 4.96e-21   NR TSA34308.1 2026772 g116736 i0 69.4 7.53488372093023 72 7 99.4 1 171 1 22 93 TSA34308.1 MAG: tyrosine--tRNA ligase, partial [Opitutales bacterium] diamond 1296 89.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
18298455 18298455 PRJNA473824_P_NODE_37775_length_197_cov_1.012500_g37137_i0 PRJNA473824 37775 197 1.0125 1.994625 Luteolibacter sp. AS25 3135776 Bacteria Bacteria 270 4.33e-68   NTclustered gi|2889346039|gb|CP151837.1| 3135776 g37137 i0 91.371 9.05583756345178 197 17 100 0 1 197 454776 454580 Luteolibacter sp. AS25 chromosome, complete genome blastn 1784 270 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. AS25
19571822 19571822 PRJNA473824_P_NODE_100496_length_173_cov_2.764706_g99858_i0 PRJNA473824 100496 173 2.764706 4.78294138 Congregicoccus parvus 3081749 Bacteria Bacteria 56.5 0.001   NTclustered gi|2599616993|dbj|AP028972.1| 3081749 g99858 i0 90.698 0.248554913294798 43 2 24 2 1 42 1725976 1726017 Opitutales bacterium ASA1 DNA, complete genome blastn 43 56.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Alterococcaceae Congregicoccus Congregicoccus parvus
22122741 22122741 PRJNA473824_P_NODE_125798_length_163_cov_4.460317_g125160_i0 PRJNA473824 125798 163 4.460317 7.27031671 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 76.8 8.06e-10   NTclustered gi|2621704341|emb|OY760937.1| 2499141 g125160 i0 95.745 0.50920245398773 47 2 29 0 11 57 4325939 4325985 MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 blastn 83 76.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
26759581 26759581 PRJNA473824_P_NODE_155441_length_151_cov_3.271930_g154803_i0 PRJNA473824 155441 151 3.27193 4.9406143 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 56.2 7.45e-8   NR MES2923432.1 2026799 g154803 i0 92.3 0.516556291390728 26 2 51.7 0 150 73 117 142 MES2923432.1 polysaccharide biosynthesis/export family protein [Verrucomicrobiota bacterium] diamond 78 56.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27360920 27360920 PRJNA473824_P_NODE_99463_length_173_cov_2.779412_g98825_i0 PRJNA473824 99463 173 2.779412 4.80838276 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47 2.81e-4   NR MEO5803531.1 2026799 g98825 i0 95.8 0.832369942196532 24 1 41.6 0 100 171 33 56 MEO5803531.1 NADH-quinone oxidoreductase subunit J [Verrucomicrobiota bacterium] diamond 144 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27455641 27455641 PRJNA473824_P_NODE_20343_length_261_cov_15.160714_g19705_i0 PRJNA473824 20343 261 15.160714 39.56946354 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.3 0.00886   NR MEI6341235.1 2026799 g19705 i0 39.7 0.666666666666667 58 33 64.4 1 257 90 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27992311 27992311 PRJNA473824_P_NODE_123185_length_167_cov_1.500000_g122547_i0 PRJNA473824 123185 167 1.5 2.505 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 39.3 0.0454   NR MBU6411812.1 2026799 g122547 i0 44.4 0.646706586826347 36 20 64.7 0 47 154 22 57 MBU6411812.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 108 39.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28086809 28086809 PRJNA473824_P_NODE_14325_length_317_cov_11.064286_g13688_i0 PRJNA473824 14325 317 11.064286 35.07378662 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0116   NR MEI6341235.1 2026799 g13688 i0 39.7 0.548895899053628 58 33 53 1 97 264 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28292363 28292363 PRJNA473824_P_NODE_169646_length_150_cov_3.309735_g169008_i0 PRJNA473824 169646 150 3.309735 4.9646025 Pseudomonadati 3379134 Bacteria Bacteria 48.5 9.5e-5   NR MBI5774171.1 2026799 g169008 i0 50.9 3.22 53 19 92 1 7 144 25 77 MBI5774171.1 ribose-phosphate pyrophosphokinase [Verrucomicrobiota bacterium] diamond 483 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28465946 28465946 PRJNA473824_P_NODE_12346_length_347_cov_14.880645_g11711_i0 PRJNA473824 12346 347 14.880645 51.63583815 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.3 0.0212   NR MEI6341235.1 2026799 g11711 i0 39.7 0.501440922190202 58 33 48.4 1 127 294 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28560682 28560682 PRJNA473824_P_NODE_52347_length_173_cov_7.117647_g51709_i0 PRJNA473824 52347 173 7.117647 12.31352931 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 42.4 0.00463   NR HWC58285.1 2499141 g51709 i0 75 0.416184971098266 24 6 41.6 0 72 1 27 50 HWC58285.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 72 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28749994 28749994 PRJNA473824_P_NODE_141747_length_151_cov_5.105263_g141109_i0 PRJNA473824 141747 151 5.105263 7.70894713 Opitutaceae bacterium 2006848 Bacteria Bacteria 56.2 1.62e-7   NR MEO7412041.1 2006848 g141109 i0 100 0.973509933774834 25 0 49.7 0 75 1 137 161 MEO7412041.1 sugar nucleotide-binding protein [Opitutaceae bacterium] diamond 147 56.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28812776 28812776 PRJNA473824_P_NODE_12348_length_347_cov_14.251613_g11713_i0 PRJNA473824 12348 347 14.251613 49.45309711 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0153   NR MEI6341235.1 2026799 g11713 i0 39.7 0.501440922190202 58 33 48.4 1 127 294 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28892205 28892205 PRJNA473824_P_NODE_165828_length_150_cov_4.300885_g165190_i0 PRJNA473824 165828 150 4.300885 6.4513275 Pseudomonadati 3379134 Bacteria Bacteria 52.8 2.96e-6   NR HEU4771561.1 2665650 g165190 i0 89.3 5.6 28 3 56 0 3 86 515 542 HEU4771561.1 heavy metal translocating P-type ATPase [Candidatus Udaeobacter sp.] diamond 840 52.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
28892209 28892209 PRJNA473824_P_NODE_58668_length_173_cov_5.044118_g58030_i0 PRJNA473824 58668 173 5.044118 8.72632414 Pseudomonadati 3379134 Bacteria Bacteria 51.6 1.07e-5   NR PYJ71959.1 2026799 g58030 i0 87.5 2.08092485549133 24 3 41.6 0 74 3 13 36 PYJ71959.1 MAG: amidohydrolase [Verrucomicrobiota bacterium] diamond 360 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29254943 29254943 PRJNA473824_P_NODE_97429_length_173_cov_2.823529_g96791_i0 PRJNA473824 97429 173 2.823529 4.88470517 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 53.1 3.05e-6   NR HEY2343654.1 2811408 g96791 i0 84 0.433526011560694 25 4 43.4 0 75 1 188 212 HEY2343654.1 NAD(P)/FAD-dependent oxidoreductase [Chthoniobacteraceae bacterium] diamond 75 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
29444408 29444408 PRJNA473824_P_NODE_95570_length_173_cov_2.852941_g94932_i0 PRJNA473824 95570 173 2.852941 4.93558793 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 50.1 3.78e-5   NR HEV7402550.1 2811408 g94932 i0 87.5 0.416184971098266 24 3 41.6 0 74 3 522 545 HEV7402550.1 hypothetical protein [Chthoniobacteraceae bacterium] diamond 72 50.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
29507681 29507681 PRJNA473824_P_NODE_163110_length_150_cov_5.849558_g162472_i0 PRJNA473824 163110 150 5.849558 8.774337 Akkermansia muciniphila 239935 Bacteria Bacteria 53.1 1.5e-6   NR MCP2374894.1 239935 g162472 i0 95.8 0.48 24 1 48 0 73 2 160 183 MCP2374894.1 replication initiation protein [Akkermansia muciniphila] diamond 72 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia muciniphila
29744654 29744654 PRJNA473824_P_NODE_59870_length_173_cov_4.875000_g59232_i0 PRJNA473824 59870 173 4.875 8.43375 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.0157   NR MEM9080841.1 2026799 g59232 i0 64 1.30057803468208 25 9 43.4 0 75 1 80 104 MEM9080841.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 225 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31087314 31087314 PRJNA473824_P_NODE_78435_length_173_cov_3.463235_g77797_i0 PRJNA473824 78435 173 3.463235 5.99139655 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.5 6.75e-5   NR NBV55412.1 2026799 g77797 i0 100 2.16763005780347 25 0 43.4 0 172 98 54 78 NBV55412.1 four helix bundle protein [Verrucomicrobiota bacterium] diamond 375 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31118621 31118621 PRJNA473824_P_NODE_160115_length_151_cov_2.850877_g159477_i0 PRJNA473824 160115 151 2.850877 4.30482427 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.1 0.00166   NR MEI7773305.1 2026799 g159477 i0 80 0.496688741721854 25 5 49.7 0 150 76 1374 1398 MEI7773305.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 75 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32004503 32004503 PRJNA473824_P_NODE_20938_length_258_cov_3.312217_g20300_i0 PRJNA473824 20938 258 3.312217 8.54551986 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 62 6.52e-10   NR HEY2614336.1 2201154 g20300 i0 54.9 1.18604651162791 51 23 59.3 0 155 3 1 51 HEY2614336.1 C1 family peptidase [Chthoniobacterales bacterium] diamond 306 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32210499 32210499 PRJNA473824_P_NODE_171638_length_150_cov_2.769912_g171000_i0 PRJNA473824 171638 150 2.769912 4.154868 Chthoniobacter 295577 Bacteria Bacteria 57 9.09e-8   NR KAB2647083.1 2026799 g171000 i0 55.6 3.78 63 0 70 1 106 2 1 63 KAB2647083.1 MAG: stage II sporulation protein M [Verrucomicrobiota bacterium] diamond 567 57 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32321178 32321178 PRJNA473824_P_NODE_110539_length_173_cov_2.529412_g109901_i0 PRJNA473824 110539 173 2.529412 4.37588276 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 47.8 2.48e-4   NR MFN0129173.1 2026801 g109901 i0 75 1.66473988439306 24 6 41.6 0 74 3 199 222 MFN0129173.1 LPS-assembly protein LptD [Verrucomicrobiales bacterium] diamond 288 47.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32605469 32605469 PRJNA473824_P_NODE_144220_length_151_cov_4.517544_g143582_i0 PRJNA473824 144220 151 4.517544 6.82149144 Opitutaceae bacterium 2006848 Bacteria Bacteria 86.3 4.68e-18   NR MFA6286429.1 2006848 g143582 i0 68.9 1.21192052980132 61 7 97.4 1 149 3 82 142 MFA6286429.1 glycoside hydrolase family 38 C-terminal domain-containing protein [Opitutaceae bacterium] diamond 183 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32731480 32731480 PRJNA473824_P_NODE_15860_length_299_cov_3.622137_g15222_i0 PRJNA473824 15860 299 3.622137 10.83018963 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 92 1.83e-20   NR RYD50519.1 2026800 g15222 i0 50.5 0.973244147157191 97 48 97.3 0 291 1 110 206 RYD50519.1 MAG: hypothetical protein EOP83_23830 [Verrucomicrobiaceae bacterium] diamond 291 92 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;