RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473824", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA473824 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29192162 29192162 PRJNA473824_P_NODE_65309_length_173_cov_4.272059_g64671_i0 PRJNA473824 65309 173 4.272059 7.39066207 Chlamydiales bacterium 2047757 Bacteria Bacteria 58.5 3.62e-8   NR MBN9378368.1 2047757 g64671 i0 96 0.867052023121387 25 1 43.4 0 171 97 258 282 MBN9378368.1 phenylalanine--tRNA ligase subunit alpha [Chlamydiales bacterium] diamond 150 58.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32083845 32083845 PRJNA473824_P_NODE_137398_length_151_cov_7.710526_g136760_i0 PRJNA473824 137398 151 7.710526 11.64289426 Bacteria 2 Bacteria Bacteria 52.4 4.21e-6   NR MBN9377887.1 2047757 g136760 i0 88 6.45695364238411 25 3 49.7 0 1 75 251 275 MBN9377887.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Chlamydiales bacterium] diamond 975 52.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;