contig_metadata
14 rows where bioproject = "PRJNA473824", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7474734 | 7474734 | PRJNA473824_P_NODE_95446_length_173_cov_2.860294_g94808_i0 | PRJNA473824 | 95446 | 173 | 2.860294 | 4.94830862 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 83.6 | 5.9e-17 | NR | HUF36126.1 | 2448054 | g94808 | i0 | 66.7 | 1.2485549132948 | 72 | 9 | 98.8 | 1 | 3 | 173 | 171 | 242 | HUF36126.1 UvrD-helicase domain-containing protein [Gemmatimonadales bacterium] | diamond | 216 | 83.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 11924919 | 11924919 | PRJNA473824_P_NODE_128370_length_160_cov_1.658537_g127732_i0 | PRJNA473824 | 128370 | 160 | 1.658537 | 2.6536592 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 230 | 5.71e-56 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g127732 | i0 | 92.547 | 129.1 | 161 | 10 | 100 | 2 | 1 | 160 | 3042656 | 3042815 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 20656 | 230 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 13850089 | 13850089 | PRJNA473824_P_NODE_32931_length_209_cov_1.976744_g32293_i0 | PRJNA473824 | 32931 | 209 | 1.976744 | 4.13139496 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 231 | 2.19e-56 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g32293 | i0 | 86.603 | 102.244019138756 | 209 | 28 | 100 | 0 | 1 | 209 | 161198 | 161406 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 21369 | 233 | 0.991416309012876 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14475738 | 14475738 | PRJNA473824_P_NODE_67172_length_173_cov_4.125000_g66534_i0 | PRJNA473824 | 67172 | 173 | 4.125 | 7.13625 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g66534 | i0 | 100 | 0.161849710982659 | 28 | 0 | 16 | 0 | 118 | 145 | 378248 | 378275 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 18947598 | 18947598 | PRJNA473824_P_NODE_107615_length_173_cov_2.617647_g106977_i0 | PRJNA473824 | 107615 | 173 | 2.617647 | 4.52852931 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89.8 | 1.11e-13 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g106977 | i0 | 91.045 | 28.3699421965318 | 67 | 4 | 38 | 2 | 6 | 71 | 4413414 | 4413349 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 4908 | 89.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 26633059 | 26633059 | PRJNA473824_P_NODE_19541_length_267_cov_3.960870_g18903_i0 | PRJNA473824 | 19541 | 267 | 3.96087 | 10.5755229 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 44.3 | 0.012 | NR | MDE2808462.1 | 2026742 | g18903 | i0 | 33.3 | 0.640449438202247 | 57 | 38 | 64 | 0 | 75 | 245 | 21 | 77 | MDE2808462.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 171 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 26759591 | 26759591 | PRJNA473824_P_NODE_22661_length_248_cov_4.345972_g22023_i0 | PRJNA473824 | 22661 | 248 | 4.345972 | 10.77801056 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 57.4 | 2.71e-7 | NR | MBN63744.1 | 2026742 | g22023 | i0 | 44.4 | 0.870967741935484 | 72 | 40 | 87.1 | 0 | 240 | 25 | 534 | 605 | MBN63744.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 216 | 57.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 27581715 | 27581715 | PRJNA473824_P_NODE_93784_length_173_cov_2.897059_g93146_i0 | PRJNA473824 | 93784 | 173 | 2.897059 | 5.01191207 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 46.6 | 6.34e-4 | NR | HMU61204.1 | 2448054 | g93146 | i0 | 60.5 | 0.745664739884393 | 43 | 15 | 71.1 | 1 | 171 | 49 | 185 | 227 | HMU61204.1 cation-translocating P-type ATPase [Gemmatimonadales bacterium] | diamond | 129 | 46.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28339562 | 28339562 | PRJNA473824_P_NODE_73506_length_173_cov_3.713235_g72868_i0 | PRJNA473824 | 73506 | 173 | 3.713235 | 6.42389655 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 47.8 | 2.39e-4 | NR | MEJ2504437.1 | 2026742 | g72868 | i0 | 47.1 | 0.884393063583815 | 51 | 22 | 79.8 | 1 | 36 | 173 | 184 | 234 | MEJ2504437.1 alpha-E domain-containing protein [Gemmatimonadota bacterium] | diamond | 153 | 47.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28434289 | 28434289 | PRJNA473824_P_NODE_144166_length_151_cov_4.526316_g143528_i0 | PRJNA473824 | 144166 | 151 | 4.526316 | 6.83473716 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 50.8 | 1.42e-5 | NR | MEW5917283.1 | 2026742 | g143528 | i0 | 80.8 | 1.01324503311258 | 26 | 5 | 51.7 | 0 | 3 | 80 | 224 | 249 | MEW5917283.1 multicopper oxidase family protein [Gemmatimonadota bacterium] | diamond | 153 | 50.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29034392 | 29034392 | PRJNA473824_P_NODE_171348_length_150_cov_2.938053_g170710_i0 | PRJNA473824 | 171348 | 150 | 2.938053 | 4.4070795 | Gemmatimonas sp. | 1962908 | Bacteria | Bacteria | 47.4 | 2.48e-4 | NR | MEO7521361.1 | 1962908 | g170710 | i0 | 42.5 | 1.46 | 73 | 19 | 100 | 1 | 150 | 1 | 10 | 82 | MEO7521361.1 hypothetical protein [Gemmatimonas sp.] | diamond | 219 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. | |
| 29318228 | 29318228 | PRJNA473824_P_NODE_159309_length_151_cov_2.973684_g158671_i0 | PRJNA473824 | 159309 | 151 | 2.973684 | 4.49026284 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 48.5 | 3.67e-5 | NR | MEO7965276.1 | 2026741 | g158671 | i0 | 75.9 | 2.86092715231788 | 29 | 7 | 57.6 | 0 | 87 | 1 | 107 | 135 | MEO7965276.1 glycosyltransferase [Gemmatimonadaceae bacterium] | diamond | 432 | 48.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30613203 | 30613203 | PRJNA473824_P_NODE_109353_length_173_cov_2.580882_g108715_i0 | PRJNA473824 | 109353 | 173 | 2.580882 | 4.46492586 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 52.8 | 3.11e-6 | NR | HXE57277.1 | 2448054 | g108715 | i0 | 88 | 0.433526011560694 | 25 | 3 | 43.4 | 0 | 99 | 173 | 171 | 195 | HXE57277.1 7-cyano-7-deazaguanine synthase QueC [Gemmatimonadales bacterium] | diamond | 75 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31340198 | 31340198 | PRJNA473824_P_NODE_68096_length_173_cov_4.066176_g67458_i0 | PRJNA473824 | 68096 | 173 | 4.066176 | 7.03448448 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 53.1 | 1.85e-7 | NR | HIC16017.1 | 2026742 | g67458 | i0 | 57.4 | 12.7976878612717 | 47 | 18 | 78 | 1 | 38 | 172 | 7 | 53 | HIC16017.1 AAA family ATPase [Gemmatimonadota bacterium] | diamond | 2214 | 53.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;