RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA473824", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Eiseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA473824 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32857326 32857326 PRJNA473824_P_NODE_40460_length_191_cov_3.305195_g39822_i0 PRJNA473824 40460 191 3.305195 6.31292245 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 47.4 4.46e-4   NR MBP6875238.1 2212470 g39822 i0 51.9 2.67015706806283 54 25 83.2 1 190 32 782 835 MBP6875238.1 Ig-like domain repeat protein [Candidatus Eiseniibacteriota bacterium] diamond 510 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;