RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473824", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA473824 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19571834 19571834 PRJNA473824_P_NODE_103716_length_173_cov_2.698529_g103078_i0 PRJNA473824 103716 173 2.698529 4.66845517 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 56.5 0.001   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g103078 i0 89.13 0.601156069364162 46 3 25 2 1 44 139439 139484 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 104 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29318211 29318211 PRJNA473824_P_NODE_106929_length_173_cov_2.632353_g106291_i0 PRJNA473824 106929 173 2.632353 4.55397069 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.9 0.00574   NR HEV8713089.1 2838779 g106291 i0 66.7 1.68208092485549 24 8 41.6 0 5 76 617 640 HEV8713089.1 translocation/assembly module TamB domain-containing protein [Candidatus Binatia bacterium] diamond 291 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;