RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473799" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA473799 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27897325 27897325 PRJNA473799_P_NODE_23765_length_271_cov_1.060606_g23491_i0 PRJNA473799 23765 271 1.060606 2.87424226 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 7.839999999999999e-43   NR HEY4528565.1 2053589 g23491 i0 86.4 0.974169741697417 88 12 97.4 0 2 265 264 351 HEY4528565.1 DUF4325 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 264 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29728485 29728485 PRJNA473799_P_NODE_39130_length_249_cov_0.875000_g38856_i0 PRJNA473799 39130 249 0.875 2.17875 Minisyncoccia bacterium 3120121 Bacteria Bacteria 86.3 1.37e-17   NR MFQ5540975.1 3120121 g38856 i0 91.5 0.566265060240964 47 4 56.6 0 108 248 2 48 MFQ5540975.1 serine hydroxymethyltransferase [Minisyncoccia bacterium] diamond 141 86.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;