RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA473799" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473799 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14473999 14473999 PRJNA473799_P_NODE_13352_length_297_cov_3.272321_g13078_i0 PRJNA473799 13352 297 3.272321 9.71879337 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 388 1.85e-103   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g13078 i0 90.268 64.2760942760943 298 28 100 1 1 297 2783317 2783614 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 19090 388 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27819072 27819072 PRJNA473799_P_NODE_54584_length_241_cov_0.916667_g54310_i0 PRJNA473799 54584 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 152 1.3199999999999996e-43   NR HVK58860.1 2447898 g54310 i0 83.8 2.98755186721992 80 13 99.6 0 1 240 182 261 HVK58860.1 DUF4159 domain-containing protein [Candidatus Kapaibacterium sp.] diamond 720 153 0.993464052287582 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32131184 32131184 PRJNA473799_P_NODE_44938_length_246_cov_0.890173_g44664_i0 PRJNA473799 44938 246 0.890173 2.18982558 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 65.1 4.99e-10   NR HVK37496.1 2447898 g44664 i0 38.3 0.98780487804878 81 49 97.6 1 3 242 233 313 HVK37496.1 tetratricopeptide repeat protein [Candidatus Kapaibacterium sp.] diamond 243 65.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;