RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA473799", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA473799 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4273010 4273010 PRJNA473799_P_NODE_6904_length_425_cov_3.710227_g6632_i0 PRJNA473799 6904 425 3.710227 15.76846475 Philodina roseola 96448 Rotifera other_Eukaryota 769 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g6632 i0 99.294 60.4541176470588 425 3 100 0 1 425 2727 3151 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 25693 769 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
20221918 20221918 PRJNA473799_P_NODE_1856_length_1052_cov_3.355465_g1661_i0 PRJNA473799 1856 1052 3.355465 35.2994918 Metazoa 33208 Rotifera other_Eukaryota 1823 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g1661 i0 97.917 39.0903041825095 1056 17 100 4 1 1052 1512 2566 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 41123 1823 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
27424071 27424071 PRJNA473799_P_NODE_35463_length_251_cov_0.865169_g35189_i0 PRJNA473799 35463 251 0.865169 2.17157419 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 43.9 0.0153   NR CAF2893944.1 2762512 g35189 i0 28.2 0.848605577689243 71 48 84.9 1 214 2 265 332 CAF2893944.1 unnamed protein product [Rotaria sp. Silwood2] diamond 213 43.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
28766020 28766020 PRJNA473799_P_NODE_34627_length_251_cov_1.179775_g34353_i0 PRJNA473799 34627 251 1.179775 2.96123525 Rotaria 231623 Rotifera other_Eukaryota 154 9.11e-43   NR CAF3869644.1 392033 g34353 i0 86.7 4.9601593625498 83 11 99.2 0 251 3 228 310 CAF3869644.1 unnamed protein product [Rotaria sordida] diamond 1245 154 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31087266 31087266 PRJNA473799_P_NODE_47155_length_244_cov_2.128655_g46881_i0 PRJNA473799 47155 244 2.128655 5.1939182 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 104 8.079999999999998e-24   NR CAF3772477.1 2762511 g46881 i0 70.4 0.995901639344262 81 24 99.6 0 243 1 202 282 CAF3772477.1 unnamed protein product [Rotaria sp. Silwood1] diamond 243 104 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
31308448 31308448 PRJNA473799_P_NODE_36355_length_250_cov_1.186441_g36081_i0 PRJNA473799 36355 250 1.186441 2.9661025 Adineta ricciae 249248 Rotifera other_Eukaryota 79.3 5.49e-15   NR CAF1171589.1 249248 g36081 i0 48 2.784 75 22 90 1 246 22 1306 1363 CAF1171589.1 unnamed protein product [Adineta ricciae] diamond 696 79.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31846123 31846123 PRJNA473799_P_NODE_46257_length_245_cov_0.895349_g45983_i0 PRJNA473799 46257 245 0.895349 2.19360505 Adineta steineri 433720 Rotifera other_Eukaryota 45.8 0.0032   NR CAF1058026.1 433720 g45983 i0 31.8 5.11836734693878 85 52 99.2 2 3 245 359 441 CAF1058026.1 unnamed protein product [Adineta steineri] diamond 1254 45.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32289596 32289596 PRJNA473799_P_NODE_28159_length_262_cov_1.629630_g27885_i0 PRJNA473799 28159 262 1.62963 4.2696306 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 166 4.37e-48   NR CAF2486736.1 2762512 g27885 i0 91.9 0.984732824427481 86 7 98.5 0 1 258 207 292 CAF2486736.1 unnamed protein product [Rotaria sp. Silwood2] diamond 258 166 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
32415889 32415889 PRJNA473799_P_NODE_22499_length_273_cov_1.540000_g22225_i0 PRJNA473799 22499 273 1.54 4.2042 Adineta ricciae 249248 Rotifera other_Eukaryota 75.5 1.66e-13   NR CAF0747031.1 249248 g22225 i0 97.1 0.769230769230769 35 1 38.5 0 272 168 2227 2261 CAF0747031.1 unnamed protein product [Adineta ricciae] diamond 210 75.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;