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contig_metadata

32 rows where bioproject = "PRJNA473799" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 32 ✖

bioproject 1

  • PRJNA473799 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6199120 6199120 PRJNA473799_P_NODE_7345_length_405_cov_11.307229_g7071_i0 PRJNA473799 7345 405 11.307229 45.79427745 Phaeophyceae 2870 SAR_Eukaryotes SAR_Eukaryotes 108 8.18e-19   NTclustered gi|16326555|gb|AF409123.1| 2889 g7071 i0 81.379 32.9728395061728 145 15 34 9 10 147 3797 3936 Alaria esculenta internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 13354 108 1 Eukaryota Sar     Phaeophyceae Laminariales Alariaceae Alaria Alaria esculenta
6823515 6823515 PRJNA473799_P_NODE_45006_length_246_cov_0.890173_g44732_i0 PRJNA473799 45006 246 0.890173 2.18982558 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 444 3.14e-120   NTclustered gi|166046624|emb|CU367741.1| 100861 g44732 i0 99.187 53.349593495935 246 2 100 0 1 246 40 285 Aphanomyces euteiches cDNA blastn 13124 444 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
8098467 8098467 PRJNA473799_P_NODE_13607_length_296_cov_1.004484_g13333_i0 PRJNA473799 13607 296 1.004484 2.97327264 Cryptosporidium sp. duck-like genotype 1856839 SAR_Eukaryotes SAR_Eukaryotes 137 7.38e-28   NTclustered gi|1272609485|gb|KY882340.1| 1856839 g13333 i0 94.382 32.3310810810811 89 5 30 0 1 89 189 101 Cryptosporidium sp. duck-like genotype isolate UY5645 28S ribosomal RNA gene, partial sequence blastn 9570 137 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. duck-like genotype
9373390 9373390 PRJNA473799_P_NODE_30728_length_257_cov_2.478261_g30454_i0 PRJNA473799 30728 257 2.478261 6.36913077 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 241 4.65e-59   NTclustered gi|820695469|tpe|LN714488.1| 572307 g30454 i0 87.923 1.61089494163424 207 21 80 4 2 206 80544 80340 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 414 241 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11299122 11299122 PRJNA473799_P_NODE_5529_length_517_cov_9.927928_g5262_i0 PRJNA473799 5529 517 9.927928 51.32738776 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 202 4.75e-47   NTclustered gi|223047900|gb|FJ032683.1| 329655 g5262 i0 86.316 67.6382978723404 190 20 43 6 331 517 2416 2230 Uncultured marine Polycystinea clone Ma_1A27 28S ribosomal RNA gene, partial sequence blastn 34969 202 1 Eukaryota Sar     Polycystinea       uncultured marine Polycystinea
13199707 13199707 PRJNA473799_P_NODE_9931_length_335_cov_1.549618_g9657_i0 PRJNA473799 9931 335 1.549618 5.1912203 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 553 7.099999999999998e-153   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g9657 i0 96.418 36.8268656716418 335 12 100 0 1 335 348 14 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12337 553 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18297605 18297605 PRJNA473799_P_NODE_57055_length_227_cov_3.064935_g56781_i0 PRJNA473799 57055 227 3.064935 6.95740245 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 281 2.37e-71   NTclustered gi|820695469|tpe|LN714488.1| 572307 g56781 i0 89.083 1.99559471365639 229 21 100 4 1 227 80266 80492 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 453 281 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
19571666 19571666 PRJNA473799_P_NODE_50296_length_243_cov_0.905882_g50022_i0 PRJNA473799 50296 243 0.905882 2.20129326 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 148 2.72e-31   NTclustered gi|300676723|gb|GQ377712.1| 323453 g50022 i0 81.921 0.728395061728395 177 31 73 1 1 177 185 10 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 177 148 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
19571674 19571674 PRJNA473799_P_NODE_50776_length_243_cov_0.905882_g50502_i0 PRJNA473799 50776 243 0.905882 2.20129326 uncultured Chrysophyceae 183512 SAR_Eukaryotes SAR_Eukaryotes 449 6.65e-122   NTclustered gi|406609781|dbj|AB749056.1| 183512 g50502 i0 100 100.004115226337 243 0 100 0 1 243 248 6 Uncultured chrysophyte gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.6-7 blastn 24301 449 1 Eukaryota Sar     Chrysophyceae       uncultured Chrysophyceae
22122198 22122198 PRJNA473799_P_NODE_35438_length_251_cov_0.865169_g35164_i0 PRJNA473799 35438 251 0.865169 2.17157419 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|813143131|ref|XM_012344133.1| 695850 g35164 i0 100 0.111553784860558 28 0 11 0 68 95 1436 1409 Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
22122217 22122217 PRJNA473799_P_NODE_36858_length_250_cov_0.870056_g36584_i0 PRJNA473799 36858 250 0.870056 2.17514 Symbiodinium microadriaticum 2951 SAR_Eukaryotes SAR_Eukaryotes 143 1.08e-39   NR CAE7382485.1 2951 g36584 i0 81.5 2.916 81 15 97.2 0 249 7 253 333 CAE7382485.1 rpl3, partial [Symbiodinium microadriaticum] diamond 729 143 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum
23397776 23397776 PRJNA473799_P_NODE_2579_length_884_cov_18.921085_g2350_i0 PRJNA473799 2579 884 18.921085 167.2623914 Heterosigma akashiwo 2829 SAR_Eukaryotes SAR_Eukaryotes 427 1.27e-114   NTclustered gi|16326556|gb|AF409124.1| 2829 g2350 i0 78.212 58.7601809954751 716 122 80 27 179 884 2706 2015 Heterosigma akashiwo internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 51944 427 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
23397904 23397904 PRJNA473799_P_NODE_34679_length_251_cov_0.882022_g34405_i0 PRJNA473799 34679 251 0.882022 2.21387522 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 420 5.41e-113   NTclustered gi|325194231|emb|FR825088.1| 890382 g34405 i0 96.813 1.31075697211155 251 8 100 0 1 251 444 694 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 329 420 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24047504 24047504 PRJNA473799_P_NODE_13779_length_294_cov_1.968326_g13505_i0 PRJNA473799 13779 294 1.968326 5.78687844 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 145 4.3699999999999995e-30   NTclustered gi|2202538974|gb|OM891880.1| 355634 g13505 i0 87.805 53.5374149659864 123 15 42 0 119 241 3709 3831 Navicula arenaria small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15740 145 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula arenaria
26633027 26633027 PRJNA473799_P_NODE_44101_length_246_cov_0.890173_g43827_i0 PRJNA473799 44101 246 0.890173 2.18982558 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.77e-4   NR XP_001030759.2 312017 g43827 i0 42.3 0.634146341463415 52 30 63.4 0 18 173 172 223 XP_001030759.2 hypothetical protein TTHERM_01015990 [Tetrahymena thermophila SB210] diamond 156 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26727592 26727592 PRJNA473799_P_NODE_31101_length_257_cov_1.157609_g30827_i0 PRJNA473799 31101 257 1.157609 2.97505513 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 132 8.239999999999998e-35   NR KAG7362008.1 303405 g30827 i0 71.1 0.968871595330739 83 24 96.9 0 254 6 163 245 KAG7362008.1 retrotransposon hot spot protein [Nitzschia inconspicua] diamond 249 132 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
26886546 26886546 PRJNA473799_P_NODE_20581_length_277_cov_1.460784_g20307_i0 PRJNA473799 20581 277 1.460784 4.04637168 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 68.6 4.71e-11   NR SBT55483.1 864142 g20307 i0 46.4 0.747292418772563 69 37 74.7 0 11 217 40 108 SBT55483.1 STP1 protein [Plasmodium ovale wallikeri] diamond 207 68.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
26918017 26918017 PRJNA473799_P_NODE_27662_length_263_cov_1.573684_g27388_i0 PRJNA473799 27662 263 1.573684 4.13878892 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 77.4 2.36e-14   NR SBT55340.1 864142 g27388 i0 49.3 2.42965779467681 75 38 85.6 0 225 1 305 379 SBT55340.1 PIR Superfamily Protein [Plasmodium ovale wallikeri] diamond 639 77.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
27329195 27329195 PRJNA473799_P_NODE_37883_length_249_cov_1.744318_g37609_i0 PRJNA473799 37883 249 1.744318 4.34335182 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 137 3.23e-36   NR KAJ1411522.1 483371 g37609 i0 81.9 1 83 15 100 0 249 1 35 117 KAJ1411522.1 hypothetical protein B484DRAFT_182663, partial [Ochromonadaceae sp. CCMP2298] diamond 249 137 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
27487015 27487015 PRJNA473799_P_NODE_51663_length_242_cov_0.911243_g51389_i0 PRJNA473799 51663 242 0.911243 2.20520806 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00108   NR CAA63219.1 5855 g51389 i0 56.8 0.855371900826446 44 18 54.5 1 144 13 141 183 CAA63219.1 pva1 [Plasmodium vivax] diamond 207 46.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
27834203 27834203 PRJNA473799_P_NODE_28704_length_261_cov_1.606383_g28430_i0 PRJNA473799 28704 261 1.606383 4.19265963 Peronospora destructor 86335 SAR_Eukaryotes SAR_Eukaryotes 145 1.6499999999999998e-42   NR CAI5713440.1 86335 g28430 i0 81.6 1 87 16 100 0 261 1 47 133 CAI5713440.1 unnamed protein product [Peronospora destructor] diamond 261 145 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
28465937 28465937 PRJNA473799_P_NODE_50126_length_243_cov_0.905882_g49852_i0 PRJNA473799 50126 243 0.905882 2.20129326 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 48.9 1.1e-4   NR XP_029214941.1 94643 g49852 i0 49 1.25925925925926 51 26 63 0 153 1 3 53 XP_029214941.1 uncharacterized protein BESB_058130 [Besnoitia besnoiti] diamond 306 48.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
28465938 28465938 PRJNA473799_P_NODE_54286_length_241_cov_0.916667_g54012_i0 PRJNA473799 54286 241 0.916667 2.20916747 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 102 9.91e-25   NR KAJ1407601.1 483371 g54012 i0 59.5 0.983402489626556 79 32 98.3 0 239 3 76 154 KAJ1407601.1 hypothetical protein B484DRAFT_337174 [Ochromonadaceae sp. CCMP2298] diamond 237 102 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
28812763 28812763 PRJNA473799_P_NODE_36108_length_250_cov_1.655367_g35834_i0 PRJNA473799 36108 250 1.655367 4.1384175 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 100 1.16e-23   NR KAJ1434220.1 483371 g35834 i0 68 0.9 75 20 86.4 2 3 218 141 214 KAJ1434220.1 UNC-like C-terminal-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 225 100 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
29129077 29129077 PRJNA473799_P_NODE_7229_length_410_cov_1.910979_g6956_i0 PRJNA473799 7229 410 1.910979 7.8350139 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.52e-7   NR SBT57149.1 864142 g6956 i0 65.9 0.3 41 14 30 0 129 7 972 1012 SBT57149.1 STP1 protein [Plasmodium ovale wallikeri] diamond 123 60.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
30424145 30424145 PRJNA473799_P_NODE_22733_length_273_cov_1.050000_g22459_i0 PRJNA473799 22733 273 1.05 2.8665 Peronospora farinosa 134698 SAR_Eukaryotes SAR_Eukaryotes 140 2.29e-40   NR CAI5704134.1 134698 g22459 i0 75.8 1 91 22 100 0 273 1 20 110 CAI5704134.1 unnamed protein product [Peronospora farinosa] diamond 273 140 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora farinosa
30992547 30992547 PRJNA473799_P_NODE_35754_length_251_cov_0.865169_g35480_i0 PRJNA473799 35754 251 0.865169 2.17157419 Babesia bovis T2Bo 484906 SAR_Eukaryotes SAR_Eukaryotes 97.8 1.75e-21   NR XP_001609528.1 484906 g35480 i0 64.9 0.884462151394422 74 22 87.3 2 31 249 207 277 XP_001609528.1 DNA gyrase/topoisomerase IV subunit A family protein [Babesia bovis T2Bo] diamond 222 97.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
31371976 31371976 PRJNA473799_P_NODE_45596_length_245_cov_1.220930_g45322_i0 PRJNA473799 45596 245 1.22093 2.9912785 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 97.1 3.0300000000000003e-21   NR KAJ1426434.1 483371 g45322 i0 72.2 0.881632653061225 72 17 88.2 1 17 232 213 281 KAJ1426434.1 hypothetical protein B484DRAFT_450707 [Ochromonadaceae sp. CCMP2298] diamond 216 97.1 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
31593391 31593391 PRJNA473799_P_NODE_32516_length_254_cov_2.044199_g32242_i0 PRJNA473799 32516 254 2.044199 5.19226546 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 65.9 3.15e-10   NR KRW99809.1 266149 g32242 i0 72.1 0.507874015748031 43 12 50.8 0 119 247 897 939 KRW99809.1 Protein kinase-like domain [Pseudocohnilembus persalinus] diamond 129 65.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32368885 32368885 PRJNA473799_P_NODE_13479_length_296_cov_3.838565_g13205_i0 PRJNA473799 13479 296 3.838565 11.3621524 root 1 Root_unresolved Root_unresolved 72 2.79e-13   NR XP_029214941.1 94643 g13205 i0 75.5 6.98310810810811 53 13 53.7 0 52 210 71 123 XP_029214941.1 uncharacterized protein BESB_058130 [Besnoitia besnoiti] diamond 2067 72 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
32574210 32574210 PRJNA473799_P_NODE_28899_length_261_cov_1.117021_g28625_i0 PRJNA473799 28899 261 1.117021 2.91542481 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 54.7 4.5e-7   NR KAJ1394621.1 483371 g28625 i0 53.3 0.689655172413793 60 23 69 2 2 181 75 129 KAJ1394621.1 40S ribosomal protein S10 [Ochromonadaceae sp. CCMP2298] diamond 180 54.7 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
32699763 32699763 PRJNA473799_P_NODE_49020_length_243_cov_3.011765_g48746_i0 PRJNA473799 49020 243 3.011765 7.31858895 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 103 1.9599999999999994e-23   NR KAJ1420827.1 483371 g48746 i0 73.8 0.987654320987654 80 21 98.8 0 2 241 373 452 KAJ1420827.1 sulfate transporter family-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 240 103 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;