RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA473799", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA473799 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6822999 6822999 PRJNA473799_P_NODE_10926_length_319_cov_0.833333_g10652_i0 PRJNA473799 10926 319 0.833333 2.65833227 Symplectoscyphus tricuspidatus 308614 Cnidaria other_Eukaryota 89.8 2.28e-13   NTclustered gi|1006165264|gb|KT190774.1| 308614 g10652 i0 85.556 6.44827586206897 90 7 28 3 14 102 2405 2489 Symplectoscyphus tricuspidatus voucher MBM240558 clone STNB12P212-1, P213-1 28S ribosomal RNA gene, partial sequence blastn 2057 89.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Sertulariidae Symplectoscyphus Symplectoscyphus tricuspidatus
22121878 22121878 PRJNA473799_P_NODE_13978_length_292_cov_6.461187_g13704_i0 PRJNA473799 13978 292 6.461187 18.86666604 Aeginura grimaldii 645378 Cnidaria other_Eukaryota 91.6 5.74e-14   NTclustered gi|1347759489|gb|MG979307.1| 645378 g13704 i0 90.141 2.13013698630137 71 5 24 2 184 253 2739 2808 Aeginura grimaldii isolate DLSI451 voucher KT10-24_St3 large subunit ribosomal RNA gene, partial sequence blastn 622 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Narcomedusae Aeginidae Aeginura Aeginura grimaldii
23397868 23397868 PRJNA473799_P_NODE_32079_length_255_cov_1.604396_g31805_i0 PRJNA473799 32079 255 1.604396 4.0912098 Buddenbrockia bryozoides 3280430 Cnidaria other_Eukaryota 62.1 3.85e-5   NTclustered gi|237512524|gb|FJ981817.1| 3280430 g31805 i0 97.222 12.2313725490196 36 1 14 0 176 211 1800 1765 Buddenbrockia plumatellae 28S large subunit ribosomal RNA gene, partial sequence blastn 3119 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Malacovalvulida Saccosporidae Buddenbrockia Buddenbrockia bryozoides
32384095 32384095 PRJNA473799_P_NODE_52299_length_242_cov_0.911243_g52025_i0 PRJNA473799 52299 242 0.911243 2.20520806 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 88.2 1.54e-18   NR KAF1745202.1 59785 g52025 i0 77.8 0.669421487603306 54 12 66.9 0 236 75 292 345 KAF1745202.1 hypothetical protein MXB_286 [Myxobolus squamalis] diamond 162 88.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;