RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA473799" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA473799 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2371386 2371386 PRJNA473799_P_NODE_6362_length_454_cov_7.160105_g6093_i0 PRJNA473799 6362 454 7.160105 32.5068767 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 510 6.04e-140   NTclustered gi|2414483|emb|Y00055.1| 5656 g6093 i0 86.837 141.334801762115 471 44 100 15 1 454 6225 6694 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 64166 514 0.992217898832685 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3646687 3646687 PRJNA473799_P_NODE_13663_length_295_cov_2.040541_g13389_i0 PRJNA473799 13663 295 2.040541 6.01959595 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 449 8.310000000000001e-122   NTclustered gi|2414483|emb|Y00055.1| 5656 g13389 i0 97.015 133.545762711864 268 6 91 2 1 267 8330 8064 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 39396 449 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3646958 3646958 PRJNA473799_P_NODE_41623_length_247_cov_1.712644_g41349_i0 PRJNA473799 41623 247 1.712644 4.23023068 Leishmania 5658 Euglenozoa other_Eukaryota 268 2.04e-67   NTclustered gi|440222388|gb|JX030056.1| 5659 g41349 i0 93.82 88.4817813765182 178 11 72 0 70 247 3 180 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 21855 268 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
9373660 9373660 PRJNA473799_P_NODE_488_length_1780_cov_13.510838_g397_i0 PRJNA473799 488 1780 13.510838 240.4929164 Heterolobosea sp. HGG1 1237086 Heterolobosea other_Eukaryota 2566 0   NTclustered gi|407750695|gb|JX441981.1| 1237086 g397 i0 92.713 44.1522471910112 1784 121 100 9 1 1780 12 1790 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 78591 2566 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
10023844 10023844 PRJNA473799_P_NODE_1548_length_1148_cov_5.061395_g1371_i0 PRJNA473799 1548 1148 5.061395 58.1048146 Neobodo 312470 Euglenozoa other_Eukaryota 894 0   NTclustered gi|62871464|gb|AY998651.1| 312471 g1371 i0 90.923 81.2421602787456 672 51 84 9 481 1148 1641 976 Neobodo designis strain SCCAP BD55 18S ribosomal RNA gene, partial sequence blastn 93266 900 0.993333333333333 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
11298762 11298762 PRJNA473799_P_NODE_13309_length_298_cov_1.368889_g13035_i0 PRJNA473799 13309 298 1.368889 4.07928922 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 545 1.04e-150   NTclustered gi|399764158|gb|JQ271669.1| 1217110 g13035 i0 99.664 65.3724832214765 298 1 100 0 1 298 250 547 Allovahlkampfia sp. PKD 2011a strain PS1073J 18S ribosomal RNA gene, partial sequence blastn 19481 545 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
12574489 12574489 PRJNA473799_P_NODE_12670_length_305_cov_2.146552_g12396_i0 PRJNA473799 12670 305 2.146552 6.5469836 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 176 1.62e-39   NTclustered gi|2414483|emb|Y00055.1| 5656 g12396 i0 98.02 39.7081967213115 101 2 33 0 1 101 7502 7402 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 12111 176 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
13199587 13199587 PRJNA473799_P_NODE_51651_length_242_cov_0.911243_g51377_i0 PRJNA473799 51651 242 0.911243 2.20520806 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 187 5.73e-43   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g51377 i0 94.958 15.0537190082645 119 6 49 0 124 242 3856 3974 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3643 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
19571788 19571788 PRJNA473799_P_NODE_7536_length_398_cov_1.516923_g7262_i0 PRJNA473799 7536 398 1.516923 6.03735354 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 176 2.17e-39   NTclustered gi|38606347|gb|AY376155.1| 51637 g7262 i0 84.358 25.1005025125628 179 28 45 0 1 179 1336 1158 Naegleria lovaniensis isolate 7372 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 9990 176 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
20847157 20847157 PRJNA473799_P_NODE_24857_length_268_cov_3.569231_g24583_i0 PRJNA473799 24857 268 3.569231 9.56553908 Neobodo cf. designis 333514 Euglenozoa other_Eukaryota 375 1.28e-99   NTclustered gi|68271531|gb|DQ086712.1| 333514 g24583 i0 91.882 160.470149253731 271 18 100 4 1 268 657 388 Neobodo cf. designis isolate B_DESICF large subunit ribosomal RNA gene, partial sequence blastn 43006 375 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo cf. designis
26823170 26823170 PRJNA473799_P_NODE_34601_length_251_cov_1.179775_g34327_i0 PRJNA473799 34601 251 1.179775 2.96123525 Bodo saltans 75058 Euglenozoa other_Eukaryota 67.4 8.34e-11   NR CUG87023.1 75058 g34327 i0 47.4 0.681274900398406 57 30 68.1 0 81 251 36 92 CUG87023.1 membrane-associated protein, putative [Bodo saltans] diamond 171 67.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32226078 32226078 PRJNA473799_P_NODE_48498_length_244_cov_0.900585_g48224_i0 PRJNA473799 48498 244 0.900585 2.1974274 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 49.3 3.54e-5   NR KNH07262.1 1314962 g48224 i0 70.6 0.836065573770492 34 10 41.8 0 81 182 84 117 KNH07262.1 hypothetical protein XU18_1794 [Perkinsela sp. CCAP 1560/4] diamond 204 49.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;