RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA473799", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA473799 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1095577 1095577 PRJNA473799_P_NODE_18661_length_281_cov_1.480769_g18387_i0 PRJNA473799 18661 281 1.480769 4.16096089 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 129 2.6499999999999996e-35   NR HVG80815.1 2072417 g18387 i0 96.7 0.65124555160142406 61 2 65.1 0 185 3 1 61 HVG80815.1 peptide-methionine (S)-S-oxide reductase MsrA [Candidatus Methylomirabilota bacterium] diamond 183 129 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
26727584 26727584 PRJNA473799_P_NODE_15521_length_288_cov_1.432558_g15247_i0 PRJNA473799 15521 288 1.432558 4.12576704 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 87.4 8.87e-18   NR HWN97098.1 2072417 g15247 i0 64.6 0.854166666666667 82 28 84.4 1 45 287 19 100 HWN97098.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 246 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30739655 30739655 PRJNA473799_P_NODE_17094_length_285_cov_0.990566_g16820_i0 PRJNA473799 17094 285 0.990566 2.8231131 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 117 1.96e-28   NR HEX2483632.1 2072417 g16820 i0 96.5 0.6 57 2 60 0 1 171 524 580 HEX2483632.1 TIM-barrel domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 171 117 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;