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contig_metadata

5 rows where bioproject = "PRJNA473641" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 5 ✖

bioproject 1

  • PRJNA473641 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23397365 23397365 PRJNA473641_P_NODE_25779_length_241_cov_0.916667_g25696_i0 PRJNA473641 25779 241 0.916667 2.20916747 Thermococcus sibiricus 172049 Archaea Archaea 60.2 1.3e-4   NTclustered gi|242264390|gb|CP001463.1| 604354 g25696 i0 89.362 0.195020746887967 47 5 20 0 116 162 369730 369776 Thermococcus sibiricus MM 739, complete genome blastn 47 60.2 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sibiricus
25321684 25321684 PRJNA473641_P_NODE_21120_length_246_cov_2.150289_g21037_i0 PRJNA473641 21120 246 2.150289 5.28971094 root 1 Root_unresolved Root_unresolved 93.6 4.96e-20   NR MDP2435292.1 1906665 g21037 i0 65.3 1.80487804878049 72 24 86.6 1 244 32 495 566 MDP2435292.1 HAD-IC family P-type ATPase [archaeon] diamond 444 93.6 1 Archaea               archaeon
27739907 27739907 PRJNA473641_P_NODE_13324_length_282_cov_1.842105_g13241_i0 PRJNA473641 13324 282 1.842105 5.1947361 Nitrosopumilus sp. 2024843 Archaea Archaea 47.8 6.62e-4   NR MDH3853572.1 2024843 g13241 i0 30.4 1.37234042553191 69 47 72.3 1 2 205 135 203 MDH3853572.1 hypothetical protein [Nitrosopumilus sp.] diamond 387 47.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
28181367 28181367 PRJNA473641_P_NODE_9086_length_327_cov_1.019685_g9003_i0 PRJNA473641 9086 327 1.019685 3.33436995 Thermoplasmatota archaeon 2806419 Archaea Archaea 51.6 7.16e-5   NR MDH7507734.1 2806419 g9003 i0 43.1 1.58715596330275 58 31 53.2 1 174 1 182 237 MDH7507734.1 hypothetical protein [Thermoplasmatota archaeon] diamond 519 51.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28749960 28749960 PRJNA473641_P_NODE_25547_length_241_cov_0.916667_g25464_i0 PRJNA473641 25547 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 57 3.1e-7   NR MDP2437703.1 1906665 g25464 i0 38.1 1.04564315352697 84 44 98.3 2 240 4 205 285 MDP2437703.1 hypothetical protein [archaeon] diamond 252 57 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;