RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA473641" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473641 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13198371 13198371 PRJNA473641_P_NODE_10911_length_306_cov_1.214592_g10828_i0 PRJNA473641 10911 306 1.214592 3.71665152 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 126 2.11e-32   NR MFL5800531.1 2762507 g10828 i0 58.6 0.970588235294118 99 41 97.1 0 9 305 7 105 MFL5800531.1 AMP-binding protein [Roseiflexaceae bacterium] diamond 297 126 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
27297448 27297448 PRJNA473641_P_NODE_22703_length_245_cov_0.895349_g22620_i0 PRJNA473641 22703 245 0.895349 2.19360505 Chloroflexota bacterium 2026724 Bacteria Bacteria 69.7 1.16e-11   NR MCY4625182.1 2026724 g22620 i0 67.9 11.1183673469388 53 16 64.9 1 187 29 1 52 MCY4625182.1 GTP-binding protein [Chloroflexota bacterium] diamond 2724 69.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30424132 30424132 PRJNA473641_P_NODE_2413_length_545_cov_1.455508_g2330_i0 PRJNA473641 2413 545 1.455508 7.9325186 Anaerolineae bacterium 2052143 Bacteria Bacteria 152 1.96e-39   NR HQE94067.1 2052143 g2330 i0 47.6 1.83302752293578 168 86 92.5 2 524 21 261 426 HQE94067.1 RCC1 repeat-containing protein [Anaerolineae bacterium] diamond 999 152 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;