RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473641" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27234239 27234239 PRJNA473641_P_NODE_24543_length_242_cov_1.366864_g24460_i0 PRJNA473641 24543 242 1.366864 3.30781088 Watersipora subatra 2589382 Bryozoa other_Eukaryota 97.8 1.7000000000000002e-22   NR XP_067931783.1 2589382 g24460 i0 84.7 2.90082644628099 59 9 73.1 0 66 242 224 282 XP_067931783.1 ATP synthase subunit gamma, mitochondrial-like [Watersipora subatra] diamond 702 97.8 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
28734580 28734580 PRJNA473641_P_NODE_25787_length_241_cov_0.916667_g25704_i0 PRJNA473641 25787 241 0.916667 2.20916747 Metazoa 33208 Bryozoa other_Eukaryota 100 1.27e-22   NR KAF6024836.1 10212 g25704 i0 67.1 10.954356846473 70 19 82.2 1 198 1 467 536 KAF6024836.1 ATP2A2 [Bugula neritina] diamond 2640 100 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;