RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473641" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA473641 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29633605 29633605 PRJNA473641_P_NODE_14710_length_270_cov_1.563452_g14627_i0 PRJNA473641 14710 270 1.563452 4.2213204 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 62.4 4.92e-9   NR KAJ5076040.1 1746090 g14627 i0 50.7 1.57777777777778 71 34 77.8 1 5 214 12 82 KAJ5076040.1 cysteine protease rdl2-related [Anaeramoeba ignava] diamond 426 62.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30503151 30503151 PRJNA473641_P_NODE_6653_length_365_cov_1.318493_g6570_i0 PRJNA473641 6653 365 1.318493 4.81249945 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 1.23e-5   NR XP_067771011.1 135588 g6570 i0 36.3 5.38356164383562 91 50 72.3 2 300 37 15 100 XP_067771011.1 AGC family protein kinase [Histomonas meleagridis] diamond 1965 54.7 0.992687385740402 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;