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contig_metadata

38 rows where bioproject = "PRJNA473201" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 38 ✖

tax_clade 1

bioproject 1

  • PRJNA473201 · 38 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
444739 444739 PRJNA473201_P_NODE_87481_length_220_cov_53.945578_g86739_i0 PRJNA473201 87481 220 53.945578 118.6802716 Methanobrevibacter arboriphilus 39441 Archaea Archaea 62.1 3.24e-5   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g86739 i0 100 0.3 33 0 15 0 117 149 270746 270714 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 66 62.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
4270414 4270414 PRJNA473201_P_NODE_20464_length_436_cov_2.041322_g19722_i0 PRJNA473201 20464 436 2.041322 8.90016392 archaeon 1906665 Archaea Archaea 68.6 2.93e-10   NR NCQ52180.1 1906665 g19722 i0 58.5 0.447247706422018 65 27 44.7 0 435 241 126 190 NCQ52180.1 RNA polymerase sigma factor RpoD [archaeon] diamond 195 68.6 1 Archaea               archaeon
6197793 6197793 PRJNA473201_P_NODE_33685_length_342_cov_1.126394_g32943_i0 PRJNA473201 33685 342 1.126394 3.85226748 archaeon 1906665 Archaea Archaea 191 1.5799999999999998e-58   NR MDP2437677.1 1906665 g32943 i0 80 1.00877192982456 115 21 99.1 1 341 3 102 216 MDP2437677.1 serine/threonine-protein kinase [archaeon] diamond 345 191 1 Archaea               archaeon
6822040 6822040 PRJNA473201_P_NODE_70766_length_249_cov_0.875000_g70024_i0 PRJNA473201 70766 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 68.6 2.37e-11   NR MDP2438613.1 1906665 g70024 i0 43.8 0.963855421686747 80 35 85.5 2 221 9 229 307 MDP2438613.1 L-dopachrome tautomerase-related protein [archaeon] diamond 240 68.6 1 Archaea               archaeon
9371948 9371948 PRJNA473201_P_NODE_59828_length_267_cov_0.886598_g59086_i0 PRJNA473201 59828 267 0.886598 2.36721666 archaeon 1906665 Archaea Archaea 137 2.28e-38   NR RYH25290.1 1906665 g59086 i0 84.7 0.808988764044944 72 11 80.9 0 3 218 135 206 RYH25290.1 MAG: 50S ribosomal protein L16 [archaeon] diamond 216 137 1 Archaea               archaeon
10648193 10648193 PRJNA473201_P_NODE_71029_length_248_cov_35.514286_g70287_i0 PRJNA473201 71029 248 35.514286 88.07542928 Methanobacterium sp. ACI-7 3240853 Archaea Archaea 52.8 0.022   NTclustered gi|2904246484|gb|CP166866.1| 3240853 g70287 i0 96.774 0.125 31 1 13 0 3 33 407652 407622 Methanobacterium sp. ACI-7 chromosome, complete genome blastn 31 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. ACI-7
11298235 11298235 PRJNA473201_P_NODE_55369_length_278_cov_2.848780_g54627_i0 PRJNA473201 55369 278 2.84878 7.9196084 archaeon 1906665 Archaea Archaea 80.5 1.17e-15   NR NCQ52213.1 1906665 g54627 i0 54.7 0.928057553956835 86 39 92.8 0 278 21 2 87 NCQ52213.1 hypothetical protein [archaeon] diamond 258 80.5 1 Archaea               archaeon
11922387 11922387 PRJNA473201_P_NODE_32690_length_346_cov_1.684982_g31948_i0 PRJNA473201 32690 346 1.684982 5.83003772 archaeon 1906665 Archaea Archaea 105 2.65e-26   NR NCQ51893.1 1906665 g31948 i0 51.2 0.728323699421965 84 36 72.8 1 344 93 46 124 NCQ51893.1 hypothetical protein [archaeon] diamond 252 105 1 Archaea               archaeon
19570160 19570160 PRJNA473201_P_NODE_72856_length_248_cov_0.874286_g72114_i0 PRJNA473201 72856 248 0.874286 2.16822928 archaeon 1906665 Archaea Archaea 80.5 1.08e-16   NR RYG53743.1 1906665 g72114 i0 70.8 1.00403225806452 48 11 58.1 1 147 4 134 178 RYG53743.1 MAG: hypothetical protein EON66_08095 [archaeon] diamond 249 80.5 1 Archaea               archaeon
20845393 20845393 PRJNA473201_P_NODE_36477_length_330_cov_1.198444_g35735_i0 PRJNA473201 36477 330 1.198444 3.9548652 archaeon 1906665 Archaea Archaea 77.8 1.61e-15   NR NCQ51556.1 1906665 g35735 i0 52.5 0.727272727272727 80 38 72.7 0 15 254 68 147 NCQ51556.1 hypothetical protein [archaeon] diamond 240 77.8 1 Archaea               archaeon
20846300 20846300 PRJNA473201_P_NODE_85417_length_241_cov_0.916667_g84675_i0 PRJNA473201 85417 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 95.9 1.73e-23   NR NCQ52293.1 1906665 g84675 i0 62.9 2.47717842323651 70 26 87.1 0 32 241 1 70 NCQ52293.1 iron-sulfur cluster insertion protein ErpA [archaeon] diamond 597 95.9 1 Archaea               archaeon
26886528 26886528 PRJNA473201_P_NODE_73501_length_247_cov_0.885057_g72759_i0 PRJNA473201 73501 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 159 3.68e-48   NR MDP2436531.1 1906665 g72759 i0 87.7 0.983805668016194 81 10 98.4 0 244 2 6 86 MDP2436531.1 translation initiation factor IF-5A [archaeon] diamond 243 159 1 Archaea               archaeon
27012832 27012832 PRJNA473201_P_NODE_44482_length_306_cov_0.991416_g43740_i0 PRJNA473201 44482 306 0.991416 3.03373296 archaeon 1906665 Archaea Archaea 50.4 2.06e-5   NR NCQ52284.1 1906665 g43740 i0 43.3 0.656862745098039 67 34 65.7 2 1 201 43 105 NCQ52284.1 hypothetical protein [archaeon] diamond 201 50.4 1 Archaea               archaeon
27076179 27076179 PRJNA473201_P_NODE_73702_length_247_cov_0.885057_g72960_i0 PRJNA473201 73702 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 47.8 2.88e-4   NR RYG93753.1 1906665 g72960 i0 58.8 0.412955465587045 34 14 41.3 0 106 5 58 91 RYG93753.1 MAG: co-chaperone GroES [archaeon] diamond 102 47.8 1 Archaea               archaeon
27265910 27265910 PRJNA473201_P_NODE_82383_length_242_cov_1.757396_g81641_i0 PRJNA473201 82383 242 1.757396 4.25289832 archaeon 1906665 Archaea Archaea 144 8.41e-42   NR RYH19594.1 1906665 g81641 i0 83.8 0.991735537190083 80 13 99.2 0 3 242 59 138 RYH19594.1 MAG: hypothetical protein EON65_25855 [archaeon] diamond 240 144 1 Archaea               archaeon
27329170 27329170 PRJNA473201_P_NODE_67483_length_250_cov_1.305085_g66741_i0 PRJNA473201 67483 250 1.305085 3.2627125 archaeon 1906665 Archaea Archaea 62.8 3.59e-9   NR NCQ52197.1 1906665 g66741 i0 45.2 1.008 84 45 99.6 1 249 1 163 246 NCQ52197.1 ankyrin repeat domain-containing protein [archaeon] diamond 252 62.8 1 Archaea               archaeon
27518588 27518588 PRJNA473201_P_NODE_73243_length_247_cov_0.885057_g72501_i0 PRJNA473201 73243 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 66.6 1.3099999999999999e-10   NR MDP2438442.1 1906665 g72501 i0 57.1 0.680161943319838 56 23 66.8 1 246 82 296 351 MDP2438442.1 mannose-1-phosphate guanyltransferase [archaeon] diamond 168 66.6 1 Archaea               archaeon
28118343 28118343 PRJNA473201_P_NODE_46325_length_300_cov_1.696035_g45583_i0 PRJNA473201 46325 300 1.696035 5.088105 archaeon 1906665 Archaea Archaea 116 2.7799999999999998e-31   NR NCQ52148.1 1906665 g45583 i0 62.6 0.91 91 34 91 0 275 3 5 95 NCQ52148.1 hypothetical protein [archaeon] diamond 273 116 1 Archaea               archaeon
28212908 28212908 PRJNA473201_P_NODE_40366_length_315_cov_1.272727_g39624_i0 PRJNA473201 40366 315 1.272727 4.00909005 archaeon 1906665 Archaea Archaea 113 1.16e-26   NR NCQ52180.1 1906665 g39624 i0 62.4 0.961904761904762 101 28 93.3 3 294 1 13 106 NCQ52180.1 RNA polymerase sigma factor RpoD [archaeon] diamond 303 113 1 Archaea               archaeon
28402621 28402621 PRJNA473201_P_NODE_72086_length_248_cov_0.880000_g71344_i0 PRJNA473201 72086 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 89.7 3.68e-20   NR NCP98238.1 1906665 g71344 i0 66.7 0.725806451612903 60 20 72.6 0 247 68 108 167 NCP98238.1 hypothetical protein [archaeon] diamond 180 89.7 1 Archaea               archaeon
28402628 28402628 PRJNA473201_P_NODE_84446_length_241_cov_1.375000_g83704_i0 PRJNA473201 84446 241 1.375 3.31375 archaeon 1906665 Archaea Archaea 121 1.2099999999999999e-32   NR MDP2435966.1 1906665 g83704 i0 73.1 0.970954356846473 78 21 97.1 0 1 234 108 185 MDP2435966.1 nucleoside-diphosphate kinase [archaeon] diamond 234 121 1 Archaea               archaeon
28718455 28718455 PRJNA473201_P_NODE_84067_length_242_cov_0.905325_g83325_i0 PRJNA473201 84067 242 0.905325 2.1908865 archaeon 1906665 Archaea Archaea 81.6 7.37e-16   NR MDP2437507.1 1906665 g83325 i0 48.8 1.01652892561983 82 36 94.2 2 242 15 705 786 MDP2437507.1 ankyrin repeat domain-containing protein [archaeon] diamond 246 81.6 1 Archaea               archaeon
29570730 29570730 PRJNA473201_P_NODE_50290_length_291_cov_1.412844_g49548_i0 PRJNA473201 50290 291 1.412844 4.11137604 archaeon 1906665 Archaea Archaea 119 2.57e-31   NR NCQ52285.1 1906665 g49548 i0 57 0.958762886597938 93 37 95.9 1 289 11 19 108 NCQ52285.1 hypothetical protein [archaeon] diamond 279 119 1 Archaea               archaeon
29791695 29791695 PRJNA473201_P_NODE_77451_length_245_cov_0.895349_g76709_i0 PRJNA473201 77451 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 95.9 3.27e-22   NR RYG64735.1 1906665 g76709 i0 53.1 0.991836734693878 81 38 99.2 0 244 2 12 92 RYG64735.1 MAG: PHA-depolymerase-like protein [archaeon] diamond 243 95.9 1 Archaea               archaeon
30266041 30266041 PRJNA473201_P_NODE_73032_length_247_cov_1.620690_g72290_i0 PRJNA473201 73032 247 1.62069 4.0031043 archaeon 1906665 Archaea Archaea 85.9 1.24e-19   NR NCP98053.1 1906665 g72290 i0 50.6 1.0080971659919 83 39 98.4 2 247 5 9 91 NCP98053.1 hypothetical protein [archaeon] diamond 249 85.9 1 Archaea               archaeon
30424099 30424099 PRJNA473201_P_NODE_22113_length_419_cov_2.135838_g21371_i0 PRJNA473201 22113 419 2.135838 8.94916122 archaeon 1906665 Archaea Archaea 108 4.6500000000000005e-27   NR NCQ52283.1 1906665 g21371 i0 49.5 0.794749403341289 111 53 77.3 2 324 1 34 144 NCQ52283.1 hypothetical protein [archaeon] diamond 333 108 1 Archaea               archaeon
30487015 30487015 PRJNA473201_P_NODE_69953_length_249_cov_0.875000_g69211_i0 PRJNA473201 69953 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 106 1.06e-24   NR RYH13192.1 1906665 g69211 i0 63.4 0.987951807228916 82 29 98.8 1 3 248 226 306 RYH13192.1 MAG: cytochrome P450 [archaeon] diamond 246 106 1 Archaea               archaeon
30676334 30676334 PRJNA473201_P_NODE_85213_length_241_cov_0.916667_g84471_i0 PRJNA473201 85213 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 65.5 1.46e-11   NR RYG65783.1 1906665 g84471 i0 66.7 0.560165975103734 45 15 56 0 239 105 66 110 RYG65783.1 MAG: hypothetical protein EON64_11205 [archaeon] diamond 135 65.5 1 Archaea               archaeon
30929269 30929269 PRJNA473201_P_NODE_25094_length_393_cov_1.843750_g24352_i0 PRJNA473201 25094 393 1.84375 7.2459375 archaeon 1906665 Archaea Archaea 91.7 2.62e-20   NR NCQ51765.1 1906665 g24352 i0 38.9 0.961832061068702 126 77 96.2 0 2 379 43 168 NCQ51765.1 ATP-binding protein [archaeon] diamond 378 91.7 1 Archaea               archaeon
31118576 31118576 PRJNA473201_P_NODE_85655_length_241_cov_0.916667_g84913_i0 PRJNA473201 85655 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 47.4 6.19e-4   NR NCP98128.1 1906665 g84913 i0 37 0.672199170124481 54 34 67.2 0 164 3 45 98 NCP98128.1 hypothetical protein [archaeon] diamond 162 47.4 1 Archaea               archaeon
31213190 31213190 PRJNA473201_P_NODE_57675_length_272_cov_2.070352_g56933_i0 PRJNA473201 57675 272 2.070352 5.63135744 archaeon 1906665 Archaea Archaea 53.9 5.83e-6   NR MDP2434370.1 1906665 g56933 i0 40 0.772058823529412 70 40 75 1 8 211 315 384 MDP2434370.1 pepsin-like aspartic protease [archaeon] diamond 210 53.9 1 Archaea               archaeon
31403546 31403546 PRJNA473201_P_NODE_11676_length_590_cov_1.632495_g10940_i0 PRJNA473201 11676 590 1.632495 9.6317205 Thermoplasmatota archaeon 2806419 Archaea Archaea 54.3 7.31e-5   NR MEM4258062.1 2806419 g10940 i0 25.3 0.884745762711864 174 117 84.9 5 2 502 82 249 MEM4258062.1 hypothetical protein [Thermoplasmatota archaeon] diamond 522 54.3 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31530083 31530083 PRJNA473201_P_NODE_70756_length_249_cov_0.875000_g70014_i0 PRJNA473201 70756 249 0.875 2.17875 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 57.8 4.16e-8   NR MFH0929052.1 3121606 g70014 i0 52 1.7710843373494 50 24 60.2 0 247 98 107 156 MFH0929052.1 TspO/MBR family protein [Candidatus Aenigmatarchaeota archaeon] diamond 441 57.8 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
31561725 31561725 PRJNA473201_P_NODE_66936_length_251_cov_0.865169_g66194_i0 PRJNA473201 66936 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 65.1 5.06e-11   NR RYH20701.1 1906665 g66194 i0 67.9 0.633466135458167 53 17 63.3 0 250 92 89 141 RYH20701.1 MAG: hypothetical protein EON65_22695 [archaeon] diamond 159 65.1 1 Archaea               archaeon
31877695 31877695 PRJNA473201_P_NODE_74637_length_247_cov_0.885057_g73895_i0 PRJNA473201 74637 247 0.885057 2.18609079 Methanopyri archaeon 2599940 Archaea Archaea 43.1 0.027   NR MDP6626546.1 2599940 g73895 i0 47.7 0.534412955465587 44 18 53.4 1 3 134 34 72 MDP6626546.1 dihydroorotase family protein [Methanopyri archaeon] diamond 132 43.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri       Methanopyri archaeon
32004445 32004445 PRJNA473201_P_NODE_81598_length_243_cov_0.905882_g80856_i0 PRJNA473201 81598 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 83.6 1.46e-16   NR MDP2435621.1 1906665 g80856 i0 53 0.814814814814815 66 31 81.5 0 35 232 283 348 MDP2435621.1 hypothetical protein [archaeon] diamond 198 83.6 1 Archaea               archaeon
32510982 32510982 PRJNA473201_P_NODE_18399_length_462_cov_2.501285_g17657_i0 PRJNA473201 18399 462 2.501285 11.5559367 archaeon 1906665 Archaea Archaea 53.9 4.02e-5   NR NCP98416.1 1906665 g17657 i0 29.4 0.662337662337662 102 63 66.2 1 399 94 58 150 NCP98416.1 hypothetical protein [archaeon] diamond 306 53.9 1 Archaea               archaeon
32605424 32605424 PRJNA473201_P_NODE_60080_length_266_cov_1.196891_g59338_i0 PRJNA473201 60080 266 1.196891 3.18373006 archaeon 1906665 Archaea Archaea 102 1.38e-24   NR NCQ52220.1 1906665 g59338 i0 55.8 2.90977443609023 86 38 97 0 6 263 90 175 NCQ52220.1 dTMP kinase [archaeon] diamond 774 102 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;