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contig_metadata

34 rows where bioproject = "PRJNA473201", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 34 ✖

tax_phylum 1

  • Kitrinoviricota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473201 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2994252 2994252 PRJNA473201_P_NODE_27203_length_378_cov_1.144262_g26461_i0 PRJNA473201 27203 378 1.144262 4.32531036 Peony yellowing associated citrivirus 2800955 Viruses Viruses 649 0   NTclustered gi|1898324221|gb|MN253488.1| 2800955 g26461 i0 97.619 81.7275132275132 378 9 100 0 1 378 7340 6963 Peony yellowing associated citrivirus strain BJ replicase, movement protein, and coat protein genes, complete cds blastn 30893 649 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
2994587 2994587 PRJNA473201_P_NODE_4623_length_942_cov_3.852704_g4069_i0 PRJNA473201 4623 942 3.852704 36.29247168 Carlavirus 12163 Viruses Viruses 481 1.4299999999999995e-152   NR WVI61735.1 2982810 g4069 i0 77.2 7.92356687898089 311 71 99 0 941 9 1491 1801 WVI61735.1 replicase [Pseudostellaria heterophylla carlavirus 1] diamond 7464 484 0.993801652892562 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus unipseudostellariae
4271361 4271361 PRJNA473201_P_NODE_70744_length_249_cov_0.875000_g70002_i0 PRJNA473201 70744 249 0.875 2.17875 Citrivirus citri 3427970 Viruses Viruses 449 6.840000000000001e-122   NTclustered gi|1904615125|dbj|LC579909.1| 129141 g70002 i0 99.197 1.98393574297189 249 2 100 0 1 249 895 647 Citrus leaf blotch virus AP05 gene for coat protein, complete cds blastn 494 449 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Citrivirus citri
4271563 4271563 PRJNA473201_P_NODE_7984_length_721_cov_1.311728_g7286_i0 PRJNA473201 7984 721 1.311728 9.45755888 Capillovirus mali 28347 Viruses Viruses 1171 0   NTclustered gi|2610240357|gb|OQ658831.1| 28347 g7286 i0 95.978 26.1095700416089 721 29 100 0 1 721 3701 2981 Capillovirus mali isolate peony/BJ4, complete genome blastn 18825 1171 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
5547147 5547147 PRJNA473201_P_NODE_22565_length_415_cov_1.023392_g21823_i0 PRJNA473201 22565 415 1.023392 4.2470768 Potexvirus ecscacti 3433821 Viruses Viruses 756 0   NTclustered gi|1110865423|gb|KX883791.1| 112227 g21823 i0 99.518 4.66987951807229 415 2 100 0 1 415 4094 4508 Cactus virus X strain SCM51431 ORF1, ORF2, ORF3, and ORF4 genes, complete cds blastn 1938 756 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
5547186 5547186 PRJNA473201_P_NODE_25045_length_394_cov_0.878505_g24303_i0 PRJNA473201 25045 394 0.878505 3.4613097 Potexvirus ecscacti 3433821 Viruses Viruses 706 0   NTclustered gi|1110865423|gb|KX883791.1| 112227 g24303 i0 98.985 6.75634517766497 394 4 100 0 1 394 1083 1476 Cactus virus X strain SCM51431 ORF1, ORF2, ORF3, and ORF4 genes, complete cds blastn 2662 706 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
5547243 5547243 PRJNA473201_P_NODE_28225_length_371_cov_1.536913_g27483_i0 PRJNA473201 28225 371 1.536913 5.70194723 Citrivirus citri 3427970 Viruses Viruses 329 1.46e-85   NTclustered gi|1904615125|dbj|LC579909.1| 129141 g27483 i0 96.482 47.0727762803235 199 7 54 0 169 367 894 1092 Citrus leaf blotch virus AP05 gene for coat protein, complete cds blastn 17464 329 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Citrivirus citri
5548255 5548255 PRJNA473201_P_NODE_82205_length_243_cov_0.876471_g81463_i0 PRJNA473201 82205 243 0.876471 2.12982453 Capillovirus mali 28347 Viruses Viruses 411 3.14e-110   NTclustered gi|2610240357|gb|OQ658831.1| 28347 g81463 i0 97.119 1 243 7 100 0 1 243 2483 2241 Capillovirus mali isolate peony/BJ4, complete genome blastn 243 411 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
8096528 8096528 PRJNA473201_P_NODE_19367_length_449_cov_1.401596_g18625_i0 PRJNA473201 19367 449 1.401596 6.29316604 Peony yellowing associated citrivirus 2800955 Viruses Viruses 741 0   NTclustered gi|1898324221|gb|MN253488.1| 2800955 g18625 i0 96.437 1.08017817371938 449 16 100 0 1 449 4612 5060 Peony yellowing associated citrivirus strain BJ replicase, movement protein, and coat protein genes, complete cds blastn 485 741 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
8096876 8096876 PRJNA473201_P_NODE_37687_length_325_cov_1.507937_g36945_i0 PRJNA473201 37687 325 1.507937 4.90079525 Capillovirus mali 28347 Viruses Viruses 551 2.469999999999999e-152   NTclustered gi|1898324468|gb|MT607622.1| 28347 g36945 i0 97.231 99.5046153846154 325 9 100 0 1 325 5521 5197 Capillovirus mali strain peony-BJ, complete genome blastn 32339 551 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
8097452 8097452 PRJNA473201_P_NODE_6867_length_779_cov_2.426346_g6212_i0 PRJNA473201 6867 779 2.426346 18.90123534 Potexvirus ecscacti 3433821 Viruses Viruses 1373 0   NTclustered gi|2754804644|tpg|BK067218.1| 112227 g6212 i0 98.46 7.34146341463415 779 12 100 0 1 779 1255 477 TPA_asm: Cactus virus X strain CN2017-2 RNA-dependent RNA polymerase gene, partial cds; and triple gene block protein 1 gene, complete cds blastn 5719 1373 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
9371076 9371076 PRJNA473201_P_NODE_11728_length_588_cov_3.739806_g10991_i0 PRJNA473201 11728 588 3.739806 21.99005928 Citrivirus citri 3427970 Viruses Viruses 870 0   NTclustered gi|992368650|gb|KR023647.1| 129141 g10991 i0 93.379 53.5187074829932 589 37 100 2 1 588 8720 8133 Citrus leaf blotch virus strain Prunus, complete genome blastn 31469 870 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Citrivirus citri
9371819 9371819 PRJNA473201_P_NODE_53668_length_283_cov_1.100000_g52926_i0 PRJNA473201 53668 283 1.1 3.113 Capillovirus mali 28347 Viruses Viruses 512 9.97e-141   NTclustered gi|2610240361|gb|OQ658832.1| 28347 g52926 i0 99.293 99.756183745583 283 2 100 0 1 283 6447 6165 Capillovirus mali isolate peony/BJ5, complete genome blastn 28231 512 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
10647303 10647303 PRJNA473201_P_NODE_22209_length_418_cov_2.869565_g21467_i0 PRJNA473201 22209 418 2.869565 11.9947817 Potexvirus ecscacti 3433821 Viruses Viruses 745 0   NTclustered gi|1990739032|tpg|BK011045.1| 112227 g21467 i0 98.804 10.3995215311005 418 5 100 0 1 418 5 422 TPA_asm: Cactus virus X isolate alfalfa A, complete genome blastn 4347 745 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
10647543 10647543 PRJNA473201_P_NODE_3449_length_1078_cov_1.142289_g2984_i0 PRJNA473201 3449 1078 1.142289 12.31387542 Peony yellowing associated citrivirus 2800955 Viruses Viruses 1736 0   NTclustered gi|1898324221|gb|MN253488.1| 2800955 g2984 i0 95.733 95.0463821892393 1078 46 100 0 1 1078 6827 5750 Peony yellowing associated citrivirus strain BJ replicase, movement protein, and coat protein genes, complete cds blastn 102460 1736 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
10647550 10647550 PRJNA473201_P_NODE_349_length_2422_cov_4.818646_g281_i0 PRJNA473201 349 2422 4.818646 116.70760612 Carlavirus 12163 Viruses Viruses 416 3e-136   NR QQG34557.1 2794422 g281 i0 75.4 0.636663914120562 256 63 31.7 0 1123 356 40 295 QQG34557.1 CP [Tagetes carlavirus 1] diamond 1542 419 0.992840095465394 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Tagetes carlavirus 1
10648494 10648494 PRJNA473201_P_NODE_8589_length_692_cov_4.555735_g7881_i0 PRJNA473201 8589 692 4.555735 31.5256862 Carlavirus 12163 Viruses Viruses 408 1.54e-138   NR QQX32722.1 12171 g7881 i0 87.4 11.6054913294798 222 28 96.2 0 692 27 293 514 QQX32722.1 replicase, partial [Helenium virus S] diamond 8031 408 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus sigmahelenii
11922138 11922138 PRJNA473201_P_NODE_1810_length_1418_cov_2.505576_g1518_i0 PRJNA473201 1810 1418 2.505576 35.52906768 Potexvirus ecscacti 3433821 Viruses Viruses 2499 0   NTclustered gi|1990739032|tpg|BK011045.1| 112227 g1518 i0 98.517 37.7136812411848 1416 21 99 0 3 1418 6600 5185 TPA_asm: Cactus virus X isolate alfalfa A, complete genome blastn 53478 2499 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
15745931 15745931 PRJNA473201_P_NODE_10953_length_610_cov_2.512104_g10220_i0 PRJNA473201 10953 610 2.512104 15.3238344 Potexvirus ecscacti 3433821 Viruses Viruses 1072 0   NTclustered gi|2754804644|tpg|BK067218.1| 112227 g10220 i0 98.361 22.7213114754098 610 10 100 0 1 610 1514 2123 TPA_asm: Cactus virus X strain CN2017-2 RNA-dependent RNA polymerase gene, partial cds; and triple gene block protein 1 gene, complete cds blastn 13860 1072 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
15746230 15746230 PRJNA473201_P_NODE_26273_length_385_cov_1.044872_g25531_i0 PRJNA473201 26273 385 1.044872 4.0227572 Capillovirus mali 28347 Viruses Viruses 645 1.3299999999999995e-180   NTclustered gi|2610240365|gb|OQ658833.1| 28347 g25531 i0 96.883 7 385 12 100 0 1 385 4173 4557 Capillovirus mali isolate peony/BJ6, complete genome blastn 2695 645 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
15746776 15746776 PRJNA473201_P_NODE_56533_length_275_cov_1.905941_g55791_i0 PRJNA473201 56533 275 1.905941 5.24133775 Peony yellowing associated citrivirus 2800955 Viruses Viruses 431 2.779999999999999e-116   NTclustered gi|1898324221|gb|MN253488.1| 2800955 g55791 i0 94.909 1 275 14 100 0 1 275 554 280 Peony yellowing associated citrivirus strain BJ replicase, movement protein, and coat protein genes, complete cds blastn 275 431 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
18294960 18294960 PRJNA473201_P_NODE_14595_length_523_cov_1.186667_g13854_i0 PRJNA473201 14595 523 1.186667 6.20626841 Potexvirus ecscacti 3433821 Viruses Viruses 880 0   NTclustered gi|1990739032|tpg|BK011045.1| 112227 g13854 i0 97.121 4.98852772466539 521 15 99 0 1 521 2079 1559 TPA_asm: Cactus virus X isolate alfalfa A, complete genome blastn 2609 880 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
18295175 18295175 PRJNA473201_P_NODE_25795_length_388_cov_2.050794_g25053_i0 PRJNA473201 25795 388 2.050794 7.95708072 Capillovirus mali 28347 Viruses Viruses 682 0   NTclustered gi|2610240365|gb|OQ658833.1| 28347 g25053 i0 98.45 99.951030927835 387 6 99 0 1 387 5549 5935 Capillovirus mali isolate peony/BJ6, complete genome blastn 38781 682 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
18946076 18946076 PRJNA473201_P_NODE_28575_length_369_cov_1.408784_g27833_i0 PRJNA473201 28575 369 1.408784 5.19841296 Potexvirus 12176 Viruses Viruses 665 0   NTclustered gi|1333967468|gb|KY581589.1| 1176736 g27833 i0 99.187 33.4525745257453 369 3 100 0 1 369 626 258 Pitaya virus X strain Nl coat protein gene, complete cds blastn 12344 665 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspitayae
20845021 20845021 PRJNA473201_P_NODE_1537_length_1507_cov_2.529986_g1274_i0 PRJNA473201 1537 1507 2.529986 38.12688902 Gaillardia latent virus 1468172 Viruses Viruses 438 6.54e-134   NR YP_009022064.1 1468172 g1274 i0 46.9 5.91838088918381 501 251 99.7 3 5 1507 967 1452 YP_009022064.1 replicase [Gaillardia latent virus] diamond 8919 438 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensgaillardiae
20845968 20845968 PRJNA473201_P_NODE_6837_length_781_cov_1.331921_g6184_i0 PRJNA473201 6837 781 1.331921 10.40230301 Potexvirus ecscacti 3433821 Viruses Viruses 1382 0   NTclustered gi|828276880|gb|KM288846.1| 112227 g6184 i0 98.592 27.9590268886044 781 11 100 0 1 781 1579 2359 Cactus virus X isolate TW-5XB-1 replication-associated protein (RdRP) gene, partial cds; and triple gene block protein 1 (TGB1), triple gene block protein 2 (TGB2), triple gene block protein 3 (TGB3), and coat protein (CP) genes, complete cds blastn 21836 1382 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
23396255 23396255 PRJNA473201_P_NODE_54119_length_282_cov_0.933014_g53377_i0 PRJNA473201 54119 282 0.933014 2.63109948 Peony yellowing associated citrivirus 2800955 Viruses Viruses 444 3.6699999999999996e-120   NTclustered gi|1898324221|gb|MN253488.1| 2800955 g53377 i0 95.035 1 282 14 100 0 1 282 4344 4063 Peony yellowing associated citrivirus strain BJ replicase, movement protein, and coat protein genes, complete cds blastn 282 444 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
24669434 24669434 PRJNA473201_P_NODE_13120_length_554_cov_1.563410_g12381_i0 PRJNA473201 13120 554 1.56341 8.6612914 Potexvirus ecscacti 3433821 Viruses Viruses 990 0   NTclustered gi|1990739032|tpg|BK011045.1| 112227 g12381 i0 98.917 5 554 6 100 0 1 554 2273 2826 TPA_asm: Cactus virus X isolate alfalfa A, complete genome blastn 2770 990 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
27613412 27613412 PRJNA473201_P_NODE_6824_length_781_cov_3.644068_g6171_i0 PRJNA473201 6824 781 3.644068 28.46017108 Helenium virus S 12171 Viruses Viruses 202 3.489999999999999e-55   NR QQX32705.1 12171 g6171 i0 46.2 0.814340588988476 212 106 81.4 3 642 7 595 798 QQX32705.1 replicase, partial [Helenium virus S] diamond 636 202 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus sigmahelenii
29349911 29349911 PRJNA473201_P_NODE_47789_length_297_cov_1.165179_g47047_i0 PRJNA473201 47789 297 1.165179 3.46058163 Peony yellowing associated citrivirus 2800955 Viruses Viruses 172 2.989999999999999e-47   NR QNN26219.1 2800955 g47047 i0 88.5 0.96969696969697 96 11 97 0 289 2 1026 1121 QNN26219.1 replicase [Peony yellowing associated citrivirus] diamond 288 172 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Peony yellowing associated citrivirus
29760126 29760126 PRJNA473201_P_NODE_13611_length_543_cov_1.261702_g12872_i0 PRJNA473201 13611 543 1.261702 6.85104186 Pseudostellaria heterophylla carlavirus 1 2982810 Viruses Viruses 256 2.75e-75   NR WVI61735.1 2982810 g12872 i0 73.9 1.8232044198895 165 43 91.2 0 497 3 1 165 WVI61735.1 replicase [Pseudostellaria heterophylla carlavirus 1] diamond 990 256 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus unipseudostellariae
30282289 30282289 PRJNA473201_P_NODE_16392_length_492_cov_1.451074_g15651_i0 PRJNA473201 16392 492 1.451074 7.13928408 Citrivirus 699166 Viruses Viruses 335 2.61e-103   NR QAT18645.1 2507947 g15651 i0 97.5 2.98170731707317 163 4 99.4 0 3 491 1726 1888 QAT18645.1 replicase polyprotein [Citrus leaf blotch virus Ac] diamond 1467 335 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Citrus leaf blotch virus Ac
30518493 30518493 PRJNA473201_P_NODE_50753_length_290_cov_1.322581_g50011_i0 PRJNA473201 50753 290 1.322581 3.8354849 Pseudostellaria heterophylla carlavirus 1 2982810 Viruses Viruses 171 6.98e-47   NR WVI61735.1 2982810 g50011 i0 84.4 3.97241379310345 96 15 99.3 0 2 289 268 363 WVI61735.1 replicase [Pseudostellaria heterophylla carlavirus 1] diamond 1152 171 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus unipseudostellariae
32289579 32289579 PRJNA473201_P_NODE_9719_length_648_cov_1.826087_g8992_i0 PRJNA473201 9719 648 1.826087 11.83304376 Pseudostellaria heterophylla carlavirus 1 2982810 Viruses Viruses 108 2.6499999999999996e-23   NR UXX34097.1 2982810 g8992 i0 32.8 1.89814814814815 201 132 92.1 3 1 597 394 593 UXX34097.1 replicase [Pseudostellaria heterophylla carlavirus 1] diamond 1230 108 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus unipseudostellariae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;